Information for 19-TTAACACCGGTAA (Motif 39)

A C G T C G A T C G T A C G T A A G T C C G T A A G T C A G T C A C T G A C T G A C G T C G T A C T G A
Reverse Opposite:
A G C T A C G T G T C A A G T C A G T C A C T G A C T G A C G T A C T G A C G T A C G T C G T A C G T A
p-value:1e-7
log p-value:-1.692e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 28.2bp
Average Position of motif in Background66.8 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTAACACCGGTAA
ATTAACACCT----
 A C G T A C G T C G A T C G T A C G T A A G T C C G T A A G T C A G T C A C T G A C T G A C G T C G T A C T G A
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTAACACCGGTAA
--ACCACCTGTT-
 A C G T C G A T C G T A C G T A A G T C C G T A A G T C A G T C A C T G A C T G A C G T C G T A C T G A
A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTAACACCGGTAA
TTTCACACCTN---
 A C G T A C G T C G A T C G T A C G T A A G T C C G T A A G T C A G T C A C T G A C T G A C G T C G T A C T G A
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTAACACCGGTAA
TTTCACACCT----
 A C G T A C G T C G A T C G T A C G T A A G T C C G T A A G T C A G T C A C T G A C T G A C G T C G T A C T G A
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTAACACCGGTAA
-TCACACCT----
 A C G T C G A T C G T A C G T A A G T C C G T A A G T C A G T C A C T G A C T G A C G T C G T A C T G A
A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TTAACACCGGTAA
TGATTGTTAACAGTTGG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A A G T C C G T A A G T C A G T C A C T G A C T G A C G T C G T A C T G A
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G A C G T A C G T

FLI1/MA0475.2/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TTAACACCGGTAA--
-----ACCGGAAGTG
 A C G T C G A T C G T A C G T A A G T C C G T A A G T C A G T C A C T G A C T G A C G T C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T G A C T G A C C T A G A C T G T G C A G C T A T C A G A G C T T C A G

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTAACACCGGTAA
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A A G T C C G T A A G T C A G T C A C T G A C T G A C G T C G T A C T G A
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTAACACCGGTAA
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A A G T C C G T A A G T C A G T C A C T G A C T G A C G T C G T A C T G A
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

ETV2/MA0762.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTAACACCGGTAA--
----AACCGGAAATA
 A C G T C G A T C G T A C G T A A G T C C G T A A G T C A G T C A C T G A C T G A C G T C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A