Information for 13-TGGGGATCCCCGC (Motif 32)

A C G T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C C T A G A C T G A C T G A C T G C T G A C G A T A G T C G T A C A G T C A G T C G T C A
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 21.8bp
Average Position of motif in Background53.1 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TGGGGATCCCCGC
-GGGGATTCCCCC
 A C G T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C A G T C A C T G A G T C
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGATCCCCGC
AGGGGAATCCCCT-
 A C G T A C G T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C A G T C A C T G A G T C
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGGGGATCCCCGC
AGGGGAATCCCCT-
 A C G T A C G T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C A G T C A C T G A G T C
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TGGGGATCCCCGC
------TCCCCA-
 A C G T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C A G T C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGGGATCCCCGC
-GGAAATCCCC--
 A C G T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C A G T C A C T G A G T C
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGGGATCCCCGC
NGGGGATTTCCC--
 A C G T A C G T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C A G T C A C T G A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGGGATCCCCGC-
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C A G T C A C T G A G T C A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGGGGATCCCCGC---
------TTCCCGCCWG
 A C G T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGGGATCCCCGC-
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C A G T C A C T G A G T C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGGGGATCCCCGC-
----DTTTCCCGCC
 A C G T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C