Information for 14-TTCTGCCAGVTTCTCT (Motif 23)

A C G T A G C T G T A C A C G T A T C G A T G C G A T C C T G A A C T G T A C G A C G T A C G T G A T C C G A T A G T C C G A T
Reverse Opposite:
C G T A C T A G C G T A C A T G G T C A T C G A A T G C T A G C A G C T C A T G T A C G A T G C C G T A A C T G T C G A T C G A
p-value:1e-9
log p-value:-2.267e+01
Information Content per bp:1.688
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif81.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets48.5 +/- 25.2bp
Average Position of motif in Background53.3 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTCTGCCAGVTTCTCT
--TTGCCAAG------
 A C G T A G C T G T A C A C G T A T C G A T G C G A T C C T G A A C T G T A C G A C G T A C G T G A T C C G A T A G T C C G A T
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTCTGCCAGVTTCTCT
---TGTCANYT-----
 A C G T A G C T G T A C A C G T A T C G A T G C G A T C C T G A A C T G T A C G A C G T A C G T G A T C C G A T A G T C C G A T
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTCTGCCAGVTTCTCT
TTCTAGAABNTTCTA-
 A C G T A G C T G T A C A C G T A T C G A T G C G A T C C T G A A C T G T A C G A C G T A C G T G A T C C G A T A G T C C G A T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A A C G T

HSF2/MA0770.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCTGCCAGVTTCTCT
TTCTAGAACGTTC---
 A C G T A G C T G T A C A C G T A T C G A T G C G A T C C T G A A C T G T A C G A C G T A C G T G A T C C G A T A G T C C G A T
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCTGCCAGVTTCTCT
TTCTAGAACGTTC---
 A C G T A G C T G T A C A C G T A T C G A T G C G A T C C T G A A C T G T A C G A C G T A C G T G A T C C G A T A G T C C G A T
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTCTGCCAGVTTCTCT
GGTCTGGCAT-------
 A C G T A C G T A G C T G T A C A C G T A T C G A T G C G A T C C T G A A C T G T A C G A C G T A C G T G A T C C G A T A G T C C G A T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTCTGCCAGVTTCTCT
TTCTAGAACGTTC---
 A C G T A G C T G T A C A C G T A T C G A T G C G A T C C T G A A C T G T A C G A C G T A C G T G A T C C G A T A G T C C G A T
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTCTGCCAGVTTCTCT
GTATTGACAGGTNNTT-
 A C G T A C G T A G C T G T A C A C G T A T C G A T G C G A T C C T G A A C T G T A C G A C G T A C G T G A T C C G A T A G T C C G A T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTCTGCCAGVTTCTCT
NTATTGACAGCTNNTT-
 A C G T A C G T A G C T G T A C A C G T A T C G A T G C G A T C C T G A A C T G T A C G A C G T A C G T G A T C C G A T A G T C C G A T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTCTGCCAGVTTCTCT
-VBTGWCAGCB-----
 A C G T A G C T G T A C A C G T A T C G A T G C G A T C C T G A A C T G T A C G A C G T A C G T G A T C C G A T A G T C C G A T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T