Information for 5-AATCAAGCCTTGM (Motif 11)

G T C A G T C A C G A T A G T C C G T A C G T A T A C G T A G C G T A C A C G T A C G T A T C G G T C A
Reverse Opposite:
C A G T A T G C C G T A C G T A A C T G A T C G A G T C A C G T C G A T C T A G C G T A A C G T C A G T
p-value:1e-12
log p-value:-2.813e+01
Information Content per bp:1.757
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.6 +/- 18.0bp
Average Position of motif in Background32.7 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATCAAGCCTTGM
CCAATCAA-------
 A C G T A C G T G T C A G T C A C G A T A G T C C G T A C G T A T A C G T A G C G T A C A C G T A C G T A T C G G T C A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AATCAAGCCTTGM
-ATTAAA------
 G T C A G T C A C G A T A G T C C G T A C G T A T A C G T A G C G T A C A C G T A C G T A T C G G T C A
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AATCAAGCCTTGM
---CAAGCTT---
 G T C A G T C A C G A T A G T C C G T A C G T A T A C G T A G C G T A C A C G T A C G T A T C G G T C A
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AATCAAGCCTTGM
CGACCCAATCAACGGTG--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A C G A T A G T C C G T A C G T A T A C G T A G C G T A C A C G T A C G T A T C G G T C A
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AATCAAGCCTTGM
HNRAATCAAT------
 A C G T A C G T A C G T G T C A G T C A C G A T A G T C C G T A C G T A T A C G T A G C G T A C A C G T A C G T A T C G G T C A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AATCAAGCCTTGM
CTAATTAA-------
 A C G T A C G T G T C A G T C A C G A T A G T C C G T A C G T A T A C G T A G C G T A C A C G T A C G T A T C G G T C A
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LMX1B/MA0703.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AATCAAGCCTTGM
TTAATTAA-------
 A C G T A C G T G T C A G T C A C G A T A G T C C G T A C G T A T A C G T A G C G T A C A C G T A C G T A T C G G T C A
A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AATCAAGCCTTGM-
GATAATTAATCCCTCTT
 A C G T A C G T A C G T G T C A G T C A C G A T A G T C C G T A C G T A T A C G T A G C G T A C A C G T A C G T A T C G G T C A A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AATCAAGCCTTGM-
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T G T C A G T C A C G A T A G T C C G T A C G T A T A C G T A G C G T A C A C G T A C G T A T C G G T C A A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AATCAAGCCTTGM-
GANNATTAATCCCTNNN
 A C G T A C G T A C G T G T C A G T C A C G A T A G T C C G T A C G T A T A C G T A G C G T A C A C G T A C G T A T C G G T C A A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A