Information for 5-TTTTGAAATT (Motif 4)

G C A T G C A T C G A T A G C T T A C G T G C A G C T A T C G A A C G T C A G T
Reverse Opposite:
G T C A T G C A A G C T C G A T A C G T A T G C T C G A G C T A C G T A C G T A
p-value:1e-13
log p-value:-3.193e+01
Information Content per bp:1.685
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.47%
Number of Background Sequences with motif931.8
Percentage of Background Sequences with motif1.98%
Average Position of motif in Targets47.7 +/- 30.0bp
Average Position of motif in Background50.4 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TTTTGAAATT-
-TTTGAAACCG
 G C A T G C A T C G A T A G C T T A C G T G C A G C T A T C G A A C G T C A G T A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGAAATT
CCTTTGATGT-
 A C G T G C A T G C A T C G A T A G C T T A C G T G C A G C T A T C G A A C G T C A G T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGAAATT
NATTGTGCAAT-
 A C G T A C G T G C A T G C A T C G A T A G C T T A C G T G C A G C T A T C G A A C G T C A G T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTTTGAAATT
ATTTGAATT-
 G C A T G C A T C G A T A G C T T A C G T G C A G C T A T C G A A C G T C A G T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGAAATT-
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T G C A T G C A T C G A T A G C T T A C G T G C A G C T A T C G A A C G T C A G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGAAATT
CCTTTGAWGT-
 A C G T G C A T G C A T C G A T A G C T T A C G T G C A G C T A T C G A A C G T C A G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTTGAAATT
TTATGCAAT-
 G C A T G C A T C G A T A G C T T A C G T G C A G C T A T C G A A C G T C A G T
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTTGAAATT---
TTGAATGAAATTCGA
 A C G T A C G T G C A T G C A T C G A T A G C T T A C G T G C A G C T A T C G A A C G T C A G T A C G T A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGAAATT-
TNCCTTTGATCTTN
 A C G T A C G T A C G T G C A T G C A T C G A T A G C T T A C G T G C A G C T A T C G A A C G T C A G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGAAATT
TNCCTTTGATGT-
 A C G T A C G T A C G T G C A T G C A T C G A T A G C T T A C G T G C A G C T A T C G A A C G T C A G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T