Information for 10-TTATTAACAGTTC (Motif 11)

A G C T A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G A C G T A C G T G A T C
Reverse Opposite:
C A T G C G T A C G T A A G T C A C G T C T A G A C G T A C G T C G T A C G T A A C G T C G T A C T G A
p-value:1e-9
log p-value:-2.116e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets19.7 +/- 15.3bp
Average Position of motif in Background35.9 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTATTAACAGTTC
NTAATTAATAT---
 A C G T A G C T A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G A C G T A C G T G A T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTATTAACAGTTC
TCTTTANTAATANN--
 A C G T A C G T A C G T A G C T A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G A C G T A C G T G A T C
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTATTAACAGTTC---
NTATTGACAGGTNNTN
 A G C T A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G A C G T A C G T G A T C A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTATTAACAGTTC----
NNANTAACGGTTNNNAN
 A G C T A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G A C G T A C G T G A T C A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

Hoxd8/MA0910.1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTATTAACAGTTC
TAAATAATTAATGGCTA
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G A C G T A C G T G A T C
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTATTAACAGTTC
TAAATAATTAATGGCTA
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G A C G T A C G T G A T C
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTATTAACAGTTC---
NTATTGACAGCTNNTT
 A G C T A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G A C G T A C G T G A T C A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTATTAACAGTTC---
GGATTGACAGGTCNTT
 A G C T A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G A C G T A C G T G A T C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

NKX6-1/MA0674.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTATTAACAGTTC
GTAATTAA------
 A C G T A G C T A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G A C G T A C G T G A T C
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTATTAACAGTTC
--ATTAACACCT-
 A G C T A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G A C G T A C G T G A T C
A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T