Information for 8-TTAGTTGTTCTTC (Motif 6)

A C G T A C G T G C T A A T C G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A A C T G C G T A G T C A A G T C C G T A C G T A A T G C C G A T C G T A C G T A
p-value:1e-12
log p-value:-2.937e+01
Information Content per bp:1.930
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.4 +/- 18.3bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTAGTTGTTCTTC-
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C G T G C T A A T C G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTAGTTGTTCTTC-
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C G T G C T A A T C G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTAGTTGTTCTTC--
-TAATTGTTCTAAAC
 A C G T A C G T G C T A A T C G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T
A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTAGTTGTTCTTC-
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTGTTCTTC
NNATNAATTGTTTNN-
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTAGTTGTTCTTC
CTATAATTGTTAGCG
 A C G T A C G T A C G T A C G T G C T A A T C G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTGTTCTTC
NNNTTAATTGGTTTTT
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTGTTCTTC-
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTGTTCTTC-
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTGTTCTTC
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T