Information for 15-NTTTCATTGN (Motif 16)

C G T A C G A T C G A T C G A T T G A C G C T A G C A T C G A T C T A G G C T A
Reverse Opposite:
C G A T G A T C G C T A C G T A C G A T A C T G G C T A G C T A G C T A G C A T
p-value:1e-5
log p-value:-1.268e+01
Information Content per bp:1.394
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif17.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.8 +/- 26.5bp
Average Position of motif in Background28.4 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---NTTTCATTGN---
NNANTTTTATTGGNNN
 A C G T A C G T A C G T C G T A C G A T C G A T C G A T T G A C G C T A G C A T C G A T C T A G G C T A A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Hoxd9/MA0913.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:NTTTCATTGN
TTTTTATTGC
 C G T A C G A T C G A T C G A T T G A C G C T A G C A T C G A T C T A G G C T A
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----NTTTCATTGN---
NTNAATTTTATTGNATT
 A C G T A C G T A C G T A C G T C G T A C G A T C G A T C G A T T G A C G C T A G C A T C G A T C T A G G C T A A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:NTTTCATTGN
NTTTTATTGG
 C G T A C G A T C G A T C G A T T G A C G C T A G C A T C G A T C T A G G C T A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---NTTTCATTGN---
NNAATTTTATTGGNTN
 A C G T A C G T A C G T C G T A C G A T C G A T C G A T T G A C G C T A G C A T C G A T C T A G G C T A A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:NTTTCATTGN
TTTTTATTGG
 C G T A C G A T C G A T C G A T T G A C G C T A G C A T C G A T C T A G G C T A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:NTTTCATTGN
NTTTTATTGG
 C G T A C G A T C G A T C G A T T G A C G C T A G C A T C G A T C T A G G C T A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:NTTTCATTGN-
-TTTAATTGCN
 C G T A C G A T C G A T C G A T T G A C G C T A G C A T C G A T C T A G G C T A A C G T
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

HOXA10/MA0899.1/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:NTTTCATTGN-
NTTTTATTACN
 C G T A C G A T C G A T C G A T T G A C G C T A G C A T C G A T C T A G G C T A A C G T
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--NTTTCATTGN----
NNCATTCATTCATNNN
 A C G T A C G T C G T A C G A T C G A T C G A T T G A C G C T A G C A T C G A T C T A G G C T A A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T