Information for 4-GCTYCYKGGSTCCCTG (Motif 7)

A C T G A G T C A C G T A G C T T A G C A G C T A C G T A C T G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C T A G A C T G C G T A A T C G A G T C G T A C G T C A C T G A A C T G C T G A C G T A A C T G A G T C
p-value:1e-10
log p-value:-2.410e+01
Information Content per bp:1.877
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 26.4bp
Average Position of motif in Background61.8 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GCTYCYKGGSTCCCTG
--------GCTCCG--
 A C T G A G T C A C G T A G C T T A G C A G C T A C G T A C T G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCTYCYKGGSTCCCTG-
--GTCATGCHTGRCTGS
 A C T G A G T C A C G T A G C T T A G C A G C T A C G T A C T G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A C T G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCTYCYKGGSTCCCTG
GCTTCC----------
 A C T G A G T C A C G T A G C T T A G C A G C T A C G T A C T G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A C T G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCTYCYKGGSTCCCTG--
--TTGGGGGCGCCCCTAG
 A C T G A G T C A C G T A G C T T A G C A G C T A C G T A C T G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GCTYCYKGGSTCCCTG------
MACCTTCYATGGCTCCCTAKTGCCY
 A C G T A C G T A C G T A C T G A G T C A C G T A G C T T A G C A G C T A C G T A C T G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G C A A G T C A G T C G A C T C A G T A T G C G A T C C T G A A C G T C T A G C T A G A G T C A C G T A G T C A G T C A G T C G A C T C G T A A C G T A G C T C T A G G A T C G A T C G A T C

ELF1/MA0473.2/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCTYCYKGGSTCCCTG
NACTTCCGGGTT-----
 A C G T A C T G A G T C A C G T A G C T T A G C A G C T A C G T A C T G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A C T G
A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T A C G T A C G T A C G T A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:7
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GCTYCYKGGSTCCCTG
CACTTCCGGGTT-----
 A C G T A C T G A G T C A C G T A G C T T A G C A G C T A C G T A C T G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A C T G
G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:GCTYCYKGGSTCCCTG-
-------CACTTCCTGT
 A C T G A G T C A C G T A G C T T A G C A G C T A C G T A C T G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GCTYCYKGGSTCCCTG
NGCTN------------
 A C G T A C T G A G T C A C G T A G C T T A G C A G C T A C G T A C T G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GCTYCYKGGSTCCCTG
CCCCCTTGGGCCCC--
 A C T G A G T C A C G T A G C T T A G C A G C T A C G T A C T G A C T G A T G C A C G T A G T C A G T C G T A C A C G T A C T G
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T