Information for 10-CTGGCGAGGTGCC (Motif 6)

A G T C A C G T A C T G C T A G A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A G T C A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.485e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.2 +/- 17.7bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGGCGAGGTGCC-
TTGGCATGGTGCCA
 A G T C A C G T A C T G C T A G A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C G T A C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGGCGAGGTGCC---
TTGGCANNNTGCCAAG
 A G T C A C G T A C T G C T A G A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C G T A C A C G T A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTGGCGAGGTGCC-
CTGGCAGNCTGCCA
 A G T C A C G T A C T G C T A G A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C G T A C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCGAGGTGCC
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C T A G A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C G T A C
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCGAGGTGCC
GTTCTCGCGAGANCC-
 A C G T A C G T A C G T A G T C A C G T A C T G C T A G A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C G T A C
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGGCGAGGTGCC
-TGGGGAAGGGCM
 A G T C A C G T A C T G C T A G A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C G T A C
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTGGCGAGGTGCC-
------AGGTGTCA
 A G T C A C G T A C T G C T A G A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTGGCGAGGTGCC
--GGCGCGCT---
 A G T C A C G T A C T G C T A G A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C G T A C
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGGCGAGGTGCC-----
--GCGGAGGTGTCGCCTC
 A G T C A C G T A C T G C T A G A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGGCGAGGTGCC
---GACAGGTGTN
 A G T C A C G T A C T G C T A G A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C G T A C
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A