Information for 7-GCTGTGGCAGAAT (Motif 4)

C T A G A G T C A C G T A C T G A G C T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A T G C G C A T A C T G A G T C A G T C C T G A A G T C C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.652e+01
Information Content per bp:1.932
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.4 +/- 31.4bp
Average Position of motif in Background33.7 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTGTGGCAGAAT
GCTGTG-------
 C T A G A G T C A C G T A C T G A G C T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTGTGGCAGAAT
TGGGTGTGGC-----
 A C G T A C G T C T A G A G T C A C G T A C T G A G C T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C G T
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTGTGGCAGAAT
GTCTGTGGTTT---
 A C G T C T A G A G T C A C G T A C T G A G C T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCTGTGGCAGAAT
---GTTGCGCAAT
 C T A G A G T C A C G T A C T G A G C T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C G T
A C G T A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTGTGGCAGAAT
GCTGASTCAGCA-
 C T A G A G T C A C G T A C T G A G C T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C G T
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTGGCAGAAT
NNHTGTGGTTWN--
 A C G T C T A G A G T C A C G T A C T G A G C T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCTGTGGCAGAAT
GCTGTGGTTT---
 C T A G A G T C A C G T A C T G A G C T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCTGTGGCAGAAT
NTGGGTGTGGCC----
 A C G T A C G T A C G T C T A G A G T C A C G T A C T G A G C T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCTGTGGCAGAAT----
WNTGCTGASTCAGCANWTTY
 A C G T A C G T A C G T C T A G A G T C A C G T A C T G A G C T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCTGTGGCAGAAT---
-CAATTGCAAAAATAT
 C T A G A G T C A C G T A C T G A G C T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T