Information for 6-TTTATTAAAA (Motif 9)

C A G T A G C T C G A T C T G A C G A T A G C T C G T A G T C A C T G A C T G A
Reverse Opposite:
A G C T A G C T C A G T A C G T C T G A G C T A G A C T G C T A C T G A G T C A
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.742
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif469.7
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets44.6 +/- 32.5bp
Average Position of motif in Background50.7 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----TTTATTAAAA---
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T A C G T C A G T A G C T C G A T C T G A C G A T A G C T C G T A G T C A C T G A C T G A A C G T A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TTTATTAAAA-
NTAATTAATAT
 C A G T A G C T C G A T C T G A C G A T A G C T C G T A G T C A C T G A C T G A A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTAAAA--
TCTTTANTAATANN
 A C G T A C G T C A G T A G C T C G A T C T G A C G A T A G C T C G T A G T C A C T G A C T G A A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

PH0100.1_Lmx1a/Jaspar

Match Rank:4
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----TTTATTAAAA---
CGAATTAATTAAAAACC
 A C G T A C G T A C G T A C G T C A G T A G C T C G A T C T G A C G A T A G C T C G T A G T C A C T G A C T G A A C G T A C G T A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TTTATTAAAA----
CCGTATTATAAACAA
 A C G T C A G T A G C T C G A T C T G A C G A T A G C T C G T A G T C A C T G A C T G A A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PH0101.1_Lmx1b/Jaspar

Match Rank:6
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TTTATTAAAA---
NNAATTAATTAAAAANN
 A C G T A C G T A C G T A C G T C A G T A G C T C G A T C T G A C G A T A G C T C G T A G T C A C T G A C T G A A C G T A C G T A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

NKX6-1/MA0674.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTTATTAAAA
GTAATTAA--
 C A G T A G C T C G A T C T G A C G A T A G C T C G T A G T C A C T G A C T G A
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:8
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TTTATTAAAA---
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T C A G T A G C T C G A T C T G A C G A T A G C T C G T A G T C A C T G A C T G A A C G T A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PH0091.1_Lhx1/Jaspar

Match Rank:9
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TTTATTAAAA---
CGAATTAATTAATAATG
 A C G T A C G T A C G T A C G T C A G T A G C T C G A T C T G A C G A T A G C T C G T A G T C A C T G A C T G A A C G T A C G T A C G T
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G

PH0153.1_Prop1/Jaspar

Match Rank:10
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TTTATTAAAA---
CGAATTAATTAAGAAAC
 A C G T A C G T A C G T A C G T C A G T A G C T C G A T C T G A C G A T A G C T C G T A G T C A C T G A C T G A A C G T A C G T A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C