Information for 5-TCTGGTGCCA (Motif 5)

A C G T A G T C A G C T A C T G A T C G A G C T A C T G G A T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G A G T C C T G A A T G C A G T C C T G A A C T G C G T A
p-value:1e-14
log p-value:-3.311e+01
Information Content per bp:1.901
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif101.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets50.8 +/- 25.3bp
Average Position of motif in Background48.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCTGGTGCCA--
---CGTGCCAAG
 A C G T A G T C A G C T A C T G A T C G A G C T A C T G G A T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCTGGTGCCA---
---GGTGCCAAGT
 A C G T A G T C A G C T A C T G A T C G A G C T A C T G G A T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCTGGTGCCA
--AGGTGTCA
 A C G T A G T C A G C T A C T G A T C G A G C T A C T G G A T C A G T C C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCTGGTGCCA--
TTTGGCGCCAAA
 A C G T A G T C A G C T A C T G A T C G A G C T A C T G G A T C A G T C C G T A A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCTGGTGCCA---
----ATGCCAACC
 A C G T A G T C A G C T A C T G A T C G A G C T A C T G G A T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCTGGTGCCA--
----TTGCCAAG
 A C G T A G T C A G C T A C T G A T C G A G C T A C T G G A T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TCTGGTGCCA-
-----TGCCAA
 A C G T A G T C A G C T A C T G A T C G A G C T A C T G G A T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TCTGGTGCCA---
-----TGTCANYT
 A C G T A G T C A G C T A C T G A T C G A G C T A C T G G A T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCTGGTGCCA---
---VBTGWCAGCB
 A C G T A G T C A G C T A C T G A T C G A G C T A C T G G A T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCTGGTGCCA-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A G T C A G C T A C T G A T C G A G C T A C T G G A T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C