Information for 4-CGCCTGCAGG (Motif 3)

G T A C T A C G G T A C G T A C A G C T A T C G A G T C G T C A A T C G A C T G
Reverse Opposite:
A G T C A T G C C A G T A C T G A T G C C T G A A C T G A C T G A T G C A C T G
p-value:1e-17
log p-value:-4.064e+01
Information Content per bp:1.844
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif205.8
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets46.6 +/- 20.1bp
Average Position of motif in Background48.6 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCAGG
SNGCACCTGCHS-
 A C G T A C G T A C G T G T A C T A C G G T A C G T A C A G C T A T C G A G T C G T C A A T C G A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCAGG--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T G T A C T A C G G T A C G T A C A G C T A T C G A G T C G T C A A T C G A C T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTGCAGG-
CCCCCTGCTGTG
 A C G T G T A C T A C G G T A C G T A C A G C T A T C G A G T C G T C A A T C G A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCAGG
NNCACCTGNN--
 A C G T A C G T G T A C T A C G G T A C G T A C A G C T A T C G A G T C G T C A A T C G A C T G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTGCAGG----
TCNCCTGCTGNGNNN
 A C G T G T A C T A C G G T A C G T A C A G C T A T C G A G T C G T C A A T C G A C T G A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.64
Offset:-9
Orientation:forward strand
Alignment:---------CGCCTGCAGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G G T A C G T A C A G C T A T C G A G T C G T C A A T C G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCAGG
AACACCTGCT--
 A C G T A C G T G T A C T A C G G T A C G T A C A G C T A T C G A G T C G T C A A T C G A C T G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGCCTGCAGG--
--CCTGCTGAGH
 G T A C T A C G G T A C G T A C A G C T A T C G A G T C G T C A A T C G A C T G A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCAGG
CGCACCTGCT--
 A C G T A C G T G T A C T A C G G T A C G T A C A G C T A T C G A G T C G T C A A T C G A C T G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTGCAGG----
TNTCCTGCTGTGNNG
 A C G T G T A C T A C G G T A C G T A C A G C T A T C G A G T C G T C A A T C G A C T G A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G