Information for 7-TAGAAACTTG (Motif 10)

A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A C G T A C G T A C G T A G T C C G A T C G T A
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.960
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets32.2 +/- 31.6bp
Average Position of motif in Background59.5 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TAGAAACTTG----
--GWAAYHTGABMC
 A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TAGAAACTTG
---AAGCTTG
 A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TAGAAACTTG----
--GWAAYHTGAKMC
 A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAGAAACTTG
AATGGAAAAT--
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAGAAACTTG-
TAACGACACGTGC
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAGAAACTTG
ACTGAAACCA-
 A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAGAAACTTG
TTTGAAACCG-
 A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TAGAAACTTG-
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0035.1_Irf5_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TAGAAACTTG
ATAAACCGAAACCAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAGAAACTTG
NATGGAAAAN--
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T