Information for 16-GCACCTTGGCCAA (Motif 23)

A C T G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A A C T G A C T G A C G T A C T G A G T C
p-value:1e-5
log p-value:-1.365e+01
Information Content per bp:1.936
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 20.1bp
Average Position of motif in Background49.2 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCACCTTGGCCAA----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCACCTTGGCCAA----
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCACCTTGGCCAA--
TGGACTTTGNNCTNTG
 A C G T A C T G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCACCTTGGCCAA
TGACACCT-------
 A C G T A C G T A C T G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCACCTTGGCCAA
-----TTGGCA--
 A C T G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCACCTTGGCCAA
CGCACCTGCT----
 A C G T A C T G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACCTTGGCCAA-
TGGACTTTGNNCTCN
 A C G T A C T G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCACCTTGGCCAA
TGACCTTGACCT-
 A C T G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCACCTTGGCCAA
----NTTGGCANN
 A C T G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GCACCTTGGCCAA
NNTNCGCACCTGTNGAN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G G T A C A G T C C G T A C T G A
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T