Information for 10-CGAGACCTTG (Motif 11)

T G A C T A C G C G T A C A T G C G T A G A T C A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C G T C A C G T A A C T G C A T G A C G T G A T C A C G T A T G C A C T G
p-value:1e-12
log p-value:-2.802e+01
Information Content per bp:1.854
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif81.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets51.7 +/- 23.2bp
Average Position of motif in Background54.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CGAGACCTTG--
--TGACCTTGAN
 T G A C T A C G C G T A C A T G C G T A G A T C A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CGAGACCTTG----
NNNNATGACCTTGANTN
 A C G T A C G T A C G T T G A C T A C G C G T A C A T G C G T A G A T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CGAGACCTTG
BNTGDCCTTG
 T G A C T A C G C G T A C A T G C G T A G A T C A G T C A C G T A C G T A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CGAGACCTTG--
--TGACCTTGAV
 T G A C T A C G C G T A C A T G C G T A G A T C A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CGAGACCTTG-
-NTGACCTTGA
 T G A C T A C G C G T A C A T G C G T A G A T C A G T C A C G T A C G T A C T G A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGAGACCTTG-
-ATGACCTTGA
 T G A C T A C G C G T A C A T G C G T A G A T C A G T C A C G T A C G T A C T G A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CGAGACCTTG--
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A C G T T G A C T A C G C G T A C A T G C G T A G A T C A G T C A C G T A C G T A C T G A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGAGACCTTG-----
GCTGACCTTGAACTN
 T G A C T A C G C G T A C A T G C G T A G A T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGAGACCTTG-
NATGACCTTGA
 T G A C T A C G C G T A C A T G C G T A G A T C A G T C A C G T A C G T A C T G A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGAGACCTTG--
-ATGACCTTGAA
 T G A C T A C G C G T A C A T G C G T A G A T C A G T C A C G T A C G T A C T G A C G T A C G T
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A