Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-54 | -1.249e+02 | 0.0000 | 197.0 | 24.84% | 2912.8 | 7.04% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-52 | -1.212e+02 | 0.0000 | 172.0 | 21.69% | 2297.6 | 5.55% | motif file (matrix) |
svg |
3 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-51 | -1.188e+02 | 0.0000 | 173.0 | 21.82% | 2364.3 | 5.71% | motif file (matrix) |
svg |
4 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-43 | -9.902e+01 | 0.0000 | 144.0 | 18.16% | 1942.5 | 4.69% | motif file (matrix) |
svg |
5 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-38 | -8.842e+01 | 0.0000 | 42.0 | 5.30% | 113.6 | 0.27% | motif file (matrix) |
svg |
6 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-37 | -8.532e+01 | 0.0000 | 87.0 | 10.97% | 804.0 | 1.94% | motif file (matrix) |
svg |
7 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-35 | -8.254e+01 | 0.0000 | 45.0 | 5.67% | 161.7 | 0.39% | motif file (matrix) |
svg |
8 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-33 | -7.790e+01 | 0.0000 | 138.0 | 17.40% | 2184.2 | 5.28% | motif file (matrix) |
svg |
9 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-30 | -7.129e+01 | 0.0000 | 73.0 | 9.21% | 677.7 | 1.64% | motif file (matrix) |
svg |
10 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-25 | -5.948e+01 | 0.0000 | 172.0 | 21.69% | 3774.9 | 9.12% | motif file (matrix) |
svg |
11 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-23 | -5.502e+01 | 0.0000 | 130.0 | 16.39% | 2506.2 | 6.06% | motif file (matrix) |
svg |
12 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-21 | -4.913e+01 | 0.0000 | 106.0 | 13.37% | 1917.1 | 4.63% | motif file (matrix) |
svg |
13 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-18 | -4.242e+01 | 0.0000 | 102.0 | 12.86% | 1978.7 | 4.78% | motif file (matrix) |
svg |
14 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-18 | -4.155e+01 | 0.0000 | 96.0 | 12.11% | 1814.2 | 4.38% | motif file (matrix) |
svg |
15 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-16 | -3.900e+01 | 0.0000 | 75.0 | 9.46% | 1250.0 | 3.02% | motif file (matrix) |
svg |
16 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-16 | -3.854e+01 | 0.0000 | 44.0 | 5.55% | 465.4 | 1.12% | motif file (matrix) |
svg |
17 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-16 | -3.805e+01 | 0.0000 | 92.0 | 11.60% | 1789.9 | 4.33% | motif file (matrix) |
svg |
18 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-16 | -3.787e+01 | 0.0000 | 80.0 | 10.09% | 1424.2 | 3.44% | motif file (matrix) |
svg |
19 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-15 | -3.567e+01 | 0.0000 | 61.0 | 7.69% | 931.3 | 2.25% | motif file (matrix) |
svg |
20 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-14 | -3.321e+01 | 0.0000 | 63.0 | 7.94% | 1041.4 | 2.52% | motif file (matrix) |
svg |
21 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-14 | -3.249e+01 | 0.0000 | 80.0 | 10.09% | 1574.3 | 3.80% | motif file (matrix) |
svg |
22 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-14 | -3.238e+01 | 0.0000 | 78.0 | 9.84% | 1514.6 | 3.66% | motif file (matrix) |
svg |
23 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-12 | -2.943e+01 | 0.0000 | 151.0 | 19.04% | 4272.8 | 10.33% | motif file (matrix) |
svg |
24 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-12 | -2.845e+01 | 0.0000 | 114.0 | 14.38% | 2901.1 | 7.01% | motif file (matrix) |
svg |
25 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-11 | -2.715e+01 | 0.0000 | 21.0 | 2.65% | 142.3 | 0.34% | motif file (matrix) |
svg |
26 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-11 | -2.670e+01 | 0.0000 | 51.0 | 6.43% | 852.8 | 2.06% | motif file (matrix) |
svg |
27 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-9 | -2.223e+01 | 0.0000 | 77.0 | 9.71% | 1833.0 | 4.43% | motif file (matrix) |
svg |
28 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-9 | -2.123e+01 | 0.0000 | 232.0 | 29.26% | 8329.0 | 20.13% | motif file (matrix) |
svg |
29 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-8 | -2.023e+01 | 0.0000 | 17.0 | 2.14% | 132.2 | 0.32% | motif file (matrix) |
svg |
30 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-7 | -1.743e+01 | 0.0000 | 44.0 | 5.55% | 894.4 | 2.16% | motif file (matrix) |
svg |
31 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.697e+01 | 0.0000 | 60.0 | 7.57% | 1452.8 | 3.51% | motif file (matrix) |
svg |
32 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-7 | -1.650e+01 | 0.0000 | 124.0 | 15.64% | 3985.2 | 9.63% | motif file (matrix) |
svg |
33 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-6 | -1.582e+01 | 0.0000 | 48.0 | 6.05% | 1082.8 | 2.62% | motif file (matrix) |
svg |
34 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-6 | -1.553e+01 | 0.0000 | 53.0 | 6.68% | 1266.4 | 3.06% | motif file (matrix) |
svg |
35 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-6 | -1.471e+01 | 0.0000 | 51.0 | 6.43% | 1231.0 | 2.98% | motif file (matrix) |
svg |
36 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-6 | -1.468e+01 | 0.0000 | 64.0 | 8.07% | 1704.8 | 4.12% | motif file (matrix) |
svg |
37 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.368e+01 | 0.0000 | 10.0 | 1.26% | 68.5 | 0.17% | motif file (matrix) |
svg |
38 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-5 | -1.355e+01 | 0.0000 | 45.0 | 5.67% | 1068.4 | 2.58% | motif file (matrix) |
svg |
39 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-5 | -1.334e+01 | 0.0000 | 21.0 | 2.65% | 319.0 | 0.77% | motif file (matrix) |
svg |
40 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.309e+01 | 0.0000 | 48.0 | 6.05% | 1194.6 | 2.89% | motif file (matrix) |
svg |
41 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.247e+01 | 0.0000 | 65.0 | 8.20% | 1863.7 | 4.50% | motif file (matrix) |
svg |
42 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.200e+01 | 0.0001 | 23.0 | 2.90% | 405.0 | 0.98% | motif file (matrix) |
svg |
43 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-5 | -1.197e+01 | 0.0001 | 46.0 | 5.80% | 1173.8 | 2.84% | motif file (matrix) |
svg |
44 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-4 | -1.103e+01 | 0.0001 | 107.0 | 13.49% | 3704.3 | 8.95% | motif file (matrix) |
svg |
45 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-4 | -1.067e+01 | 0.0002 | 17.0 | 2.14% | 266.8 | 0.64% | motif file (matrix) |
svg |
46 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-4 | -1.063e+01 | 0.0002 | 27.0 | 3.40% | 570.0 | 1.38% | motif file (matrix) |
svg |
47 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -1.049e+01 | 0.0002 | 41.0 | 5.17% | 1061.8 | 2.57% | motif file (matrix) |
svg |
48 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-4 | -9.979e+00 | 0.0004 | 54.0 | 6.81% | 1583.2 | 3.83% | motif file (matrix) |
svg |
49 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-4 | -9.943e+00 | 0.0004 | 18.0 | 2.27% | 311.6 | 0.75% | motif file (matrix) |
svg |
50 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-4 | -9.705e+00 | 0.0004 | 59.0 | 7.44% | 1799.3 | 4.35% | motif file (matrix) |
svg |
51 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-4 | -9.306e+00 | 0.0006 | 42.0 | 5.30% | 1159.8 | 2.80% | motif file (matrix) |
svg |
52 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-4 | -9.254e+00 | 0.0007 | 46.0 | 5.80% | 1316.0 | 3.18% | motif file (matrix) |
svg |
53 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-3 | -9.135e+00 | 0.0007 | 18.0 | 2.27% | 332.6 | 0.80% | motif file (matrix) |
svg |
54 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-3 | -9.037e+00 | 0.0008 | 57.0 | 7.19% | 1764.9 | 4.27% | motif file (matrix) |
svg |
55 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-3 | -8.938e+00 | 0.0009 | 30.0 | 3.78% | 736.6 | 1.78% | motif file (matrix) |
svg |
56 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.852e+00 | 0.0009 | 45.0 | 5.67% | 1300.2 | 3.14% | motif file (matrix) |
svg |
57 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.342e+00 | 0.0015 | 93.0 | 11.73% | 3349.2 | 8.09% | motif file (matrix) |
svg |
58 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -8.042e+00 | 0.0020 | 67.0 | 8.45% | 2254.3 | 5.45% | motif file (matrix) |
svg |
59 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-3 | -7.940e+00 | 0.0022 | 11.0 | 1.39% | 161.6 | 0.39% | motif file (matrix) |
svg |
60 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.740e+00 | 0.0026 | 249.0 | 31.40% | 10779.3 | 26.05% | motif file (matrix) |
svg |
61 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-3 | -7.678e+00 | 0.0028 | 64.0 | 8.07% | 2158.4 | 5.22% | motif file (matrix) |
svg |
62 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -7.536e+00 | 0.0031 | 54.0 | 6.81% | 1751.0 | 4.23% | motif file (matrix) |
svg |
63 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-3 | -7.506e+00 | 0.0032 | 25.0 | 3.15% | 621.3 | 1.50% | motif file (matrix) |
svg |
64 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -7.459e+00 | 0.0033 | 6.0 | 0.76% | 52.9 | 0.13% | motif file (matrix) |
svg |
65 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-3 | -7.054e+00 | 0.0048 | 30.0 | 3.78% | 827.5 | 2.00% | motif file (matrix) |
svg |
66 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -6.965e+00 | 0.0052 | 22.0 | 2.77% | 538.9 | 1.30% | motif file (matrix) |
svg |
67 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -6.947e+00 | 0.0052 | 7.0 | 0.88% | 79.8 | 0.19% | motif file (matrix) |
svg |
68 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.651e+00 | 0.0069 | 67.0 | 8.45% | 2380.2 | 5.75% | motif file (matrix) |
svg |
69 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-2 | -6.574e+00 | 0.0074 | 56.0 | 7.06% | 1914.7 | 4.63% | motif file (matrix) |
svg |
70 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -6.003e+00 | 0.0128 | 97.0 | 12.23% | 3796.0 | 9.17% | motif file (matrix) |
svg |
71 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -5.875e+00 | 0.0144 | 8.0 | 1.01% | 122.3 | 0.30% | motif file (matrix) |
svg |
72 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -5.814e+00 | 0.0151 | 32.0 | 4.04% | 979.7 | 2.37% | motif file (matrix) |
svg |
73 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.629e+00 | 0.0179 | 27.0 | 3.40% | 793.0 | 1.92% | motif file (matrix) |
svg |
74 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.621e+00 | 0.0179 | 20.0 | 2.52% | 527.9 | 1.28% | motif file (matrix) |
svg |
75 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.527e+00 | 0.0193 | 16.0 | 2.02% | 387.3 | 0.94% | motif file (matrix) |
svg |
76 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.496e+00 | 0.0196 | 41.0 | 5.17% | 1373.0 | 3.32% | motif file (matrix) |
svg |
77 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-2 | -5.407e+00 | 0.0212 | 16.0 | 2.02% | 393.0 | 0.95% | motif file (matrix) |
svg |
78 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -5.379e+00 | 0.0215 | 6.0 | 0.76% | 79.4 | 0.19% | motif file (matrix) |
svg |
79 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.334e+00 | 0.0222 | 9.0 | 1.13% | 163.9 | 0.40% | motif file (matrix) |
svg |
80 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-2 | -5.207e+00 | 0.0249 | 38.0 | 4.79% | 1270.0 | 3.07% | motif file (matrix) |
svg |
81 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-2 | -5.198e+00 | 0.0249 | 23.0 | 2.90% | 663.8 | 1.60% | motif file (matrix) |
svg |
82 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-2 | -5.165e+00 | 0.0254 | 21.0 | 2.65% | 588.3 | 1.42% | motif file (matrix) |
svg |
83 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.034e+00 | 0.0286 | 40.0 | 5.04% | 1369.8 | 3.31% | motif file (matrix) |
svg |
84 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-2 | -4.858e+00 | 0.0337 | 9.0 | 1.13% | 176.8 | 0.43% | motif file (matrix) |
svg |
85 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -4.785e+00 | 0.0358 | 17.0 | 2.14% | 457.7 | 1.11% | motif file (matrix) |
svg |
86 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -4.746e+00 | 0.0368 | 75.0 | 9.46% | 2954.9 | 7.14% | motif file (matrix) |
svg |