Information for 11-CCTGTTGGCA (Motif 9)

G T A C A G T C A C G T A C T G A G C T A C G T C T A G A C T G G T A C C G T A
Reverse Opposite:
A C G T A C T G T G A C G A T C G T C A T C G A A G T C C G T A C T A G C A T G
p-value:1e-12
log p-value:-2.945e+01
Information Content per bp:1.839
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif173.3
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets54.4 +/- 27.5bp
Average Position of motif in Background47.5 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CCTGTTGGCA-
--GGTTGGCAT
 G T A C A G T C A C G T A C T G A G C T A C G T C T A G A C T G G T A C C G T A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CCTGTTGGCA--
--NNTTGGCANN
 G T A C A G T C A C G T A C T G A G C T A C G T C T A G A C T G G T A C C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CCTGTTGGCA--
---NTTGGCANN
 G T A C A G T C A C G T A C T G A G C T A C G T C T A G A C T G G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CCTGTTGGCA-
---CTTGGCAA
 G T A C A G T C A C G T A C T G A G C T A C G T C T A G A C T G G T A C C G T A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTTGGCA----
NGTAGGTTGGCATNNN
 A C G T A C G T G T A C A G T C A C G T A C T G A G C T A C G T C T A G A C T G G T A C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CCTGTTGGCA
----TTGGCA
 G T A C A G T C A C G T A C T G A G C T A C G T C T A G A C T G G T A C C G T A
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Foxo1/MA0480.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCTGTTGGCA
TCCTGTTTACA
 A C G T G T A C A G T C A C G T A C T G A G C T A C G T C T A G A C T G G T A C C G T A
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCTGTTGGCA-
--NGTGGGCAT
 G T A C A G T C A C G T A C T G A G C T A C G T C T A G A C T G G T A C C G T A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCTGTTGGCA-
--TNNGGGCAG
 G T A C A G T C A C G T A C T G A G C T A C G T C T A G A C T G G T A C C G T A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTGTTGGCA--
GGTGYTGACAGS
 G T A C A G T C A C G T A C T G A G C T A C G T C T A G A C T G G T A C C G T A A C G T A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G