Information for 8-TGVACAGATCAAT (Motif 8)

C G A T A C T G T A G C C G T A A T G C C G T A C T A G C G T A A C G T A G T C C G T A C G T A C G A T
Reverse Opposite:
C G T A C G A T C G A T A C T G C G T A A C G T A G T C A C G T A T C G A C G T A C T G A G T C C G T A
p-value:1e-15
log p-value:-3.677e+01
Information Content per bp:1.865
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.6 +/- 20.5bp
Average Position of motif in Background32.6 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.80
Offset:3
Orientation:forward strand
Alignment:TGVACAGATCAAT
---HNRAATCAAT
 C G A T A C T G T A G C C G T A A T G C C G T A C T A G C G T A A C G T A G T C C G T A C G T A C G A T
A C G T A C G T A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:TGVACAGATCAAT--
-----DGATCRATAN
 C G A T A C T G T A G C C G T A A T G C C G T A C T A G C G T A A C G T A G T C C G T A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

ONECUT3/MA0757.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGVACAGATCAAT---
--AAAAAATCAATAAT
 C G A T A C T G T A G C C G T A A T G C C G T A C T A G C G T A A C G T A G T C C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGVACAGATCAAT-----
-TCACCCATCAATAAACA
 C G A T A C T G T A G C C G T A A T G C C G T A C T A G C G T A A C G T A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGVACAGATCAAT------
---GAAGATCAATCACTTA
 C G A T A C T G T A G C C G T A A T G C C G T A C T A G C G T A A C G T A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

ONECUT2/MA0756.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGVACAGATCAAT---
--AAAAAATCGATAAT
 C G A T A C T G T A G C C G T A A T G C C G T A C T A G C G T A A C G T A G T C C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGVACAGATCAAT------
---GAAGATCAATCACTAA
 C G A T A C T G T A G C C G T A A T G C C G T A C T A G C G T A A C G T A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGVACAGATCAAT---
--AAAAAATCGATAAT
 C G A T A C T G T A G C C G T A A T G C C G T A C T A G C G T A A C G T A G T C C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

PH0014.1_Cphx/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGVACAGATCAAT
ATGATCGAATCAAA
 A C G T C G A T A C T G T A G C C G T A A T G C C G T A C T A G C G T A A C G T A G T C C G T A C G T A C G A T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

CUX1/MA0754.1/Jaspar

Match Rank:10
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TGVACAGATCAAT--
-----TAATCGATAA
 C G A T A C T G T A G C C G T A A T G C C G T A C T A G C G T A A C G T A G T C C G T A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A