Information for 9-CCCTTGTGTTGTT (Motif 10)

G T A C A G T C A G T C G A C T A C G T A T C G A C G T T A C G A G C T C G A T A C T G A C G T C A G T
Reverse Opposite:
G C T A C G T A A G T C C G T A C T G A A G T C G T C A A T G C C G T A C T G A A C T G A C T G A C T G
p-value:1e-11
log p-value:-2.628e+01
Information Content per bp:1.821
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets61.0 +/- 28.4bp
Average Position of motif in Background41.6 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCTTGTGTTGTT
CCATTGTTTT---
 G T A C A G T C A G T C G A C T A C G T A T C G A C G T T A C G A G C T C G A T A C T G A C G T C A G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCCTTGTGTTGTT
-CTTTGT------
 G T A C A G T C A G T C G A C T A C G T A T C G A C G T T A C G A G C T C G A T A C T G A C G T C A G T
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCTTGTGTTGTT
CCTTTGTT-----
 G T A C A G T C A G T C G A C T A C G T A T C G A C G T T A C G A G C T C G A T A C T G A C G T C A G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCCTTGTGTTGTT
CCTTTGTTTT---
 G T A C A G T C A G T C G A C T A C G T A T C G A C G T T A C G A G C T C G A T A C T G A C G T C A G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCTTGTGTTGTT
CCWTTGTYYB---
 G T A C A G T C A G T C G A C T A C G T A T C G A C G T T A C G A G C T C G A T A C T G A C G T C A G T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCCTTGTGTTGTT
AGGVNCCTTTGT------
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A G T C G A C T A C G T A T C G A C G T T A C G A G C T C G A T A C T G A C G T C A G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTGTGTTGTT
NCCATTGTTY----
 A C G T G T A C A G T C A G T C G A C T A C G T A T C G A C G T T A C G A G C T C G A T A C T G A C G T C A G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCTTGTGTTGTT
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T G T A C A G T C A G T C G A C T A C G T A T C G A C G T T A C G A G C T C G A T A C T G A C G T C A G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCCTTGTGTTGTT
CCATTGTTYB---
 G T A C A G T C A G T C G A C T A C G T A T C G A C G T T A C G A G C T C G A T A C T G A C G T C A G T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCCTTGTGTTGTT
CCWTTGTY-----
 G T A C A G T C A G T C G A C T A C G T A T C G A C G T T A C G A G C T C G A T A C T G A C G T C A G T
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T