Information for 4-CGCCGCCATT (Motif 8)

T G A C C T A G G T A C A T G C T C A G A G T C T A G C T G C A A G C T A G C T
Reverse Opposite:
T C G A T C G A A C G T A T C G T C A G A G T C T A C G C A T G G A T C A C T G
p-value:1e-10
log p-value:-2.383e+01
Information Content per bp:1.586
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif396.2
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets43.8 +/- 25.1bp
Average Position of motif in Background50.2 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CGCCGCCATT-
GTCCGCCATTA
 T G A C C T A G G T A C A T G C T C A G A G T C T A G C T G C A A G C T A G C T A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CGCCGCCATT---
-GCCGCCATCTTG
 T G A C C T A G G T A C A T G C T C A G A G T C T A G C T G C A A G C T A G C T A C G T A C G T A C G T
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CGCCGCCATT---
-GCNGCCATCTTG
 T G A C C T A G G T A C A T G C T C A G A G T C T A G C T G C A A G C T A G C T A C G T A C G T A C G T
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCATT---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T T G A C C T A G G T A C A T G C T C A G A G T C T A G C T G C A A G C T A G C T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CGCCGCCATT---
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T T G A C C T A G G T A C A T G C T C A G A G T C T A G C T G C A A G C T A G C T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGCCGCCATT-
-GCAGTGATTT
 T G A C C T A G G T A C A T G C T C A G A G T C T A G C T G C A A G C T A G C T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGCCGCCATT---
---GGCCATTAAC
 T G A C C T A G G T A C A T G C T C A G A G T C T A G C T G C A A G C T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCATT---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T T G A C C T A G G T A C A T G C T C A G A G T C T A G C T G C A A G C T A G C T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCATT---
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T T G A C C T A G G T A C A T G C T C A G A G T C T A G C T G C A A G C T A G C T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGCCGCCATT
----GTCATN
 T G A C C T A G G T A C A T G C T C A G A G T C T A G C T G C A A G C T A G C T
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G