Information for 2-CCCAAGACTGGTG (Motif 5)

A G T C A G T C A T G C C G T A C T G A A C T G C G T A A G T C A G C T A T C G A T C G A C G T A C T G
Reverse Opposite:
G T A C G T C A A T G C A T G C C T G A A C T G G A C T A G T C A G C T A C G T A T C G A C T G C T A G
p-value:1e-10
log p-value:-2.532e+01
Information Content per bp:1.810
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 18.1bp
Average Position of motif in Background59.7 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ID4/MA0824.1/Jaspar

Match Rank:1
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCCAAGACTGGTG--
-----GACAGGTGTN
 A G T C A G T C A T G C C G T A C T G A A C T G C G T A A G T C A G C T A T C G A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCCAAGACTGGTG
---TWGTCTGV--
 A G T C A G T C A T G C C G T A C T G A A C T G C G T A A G T C A G C T A T C G A T C G A C G T A C T G
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCCAAGACTGGTG
AGCCTCAGGCA----
 A C G T A C G T A G T C A G T C A T G C C G T A C T G A A C T G C G T A A G T C A G C T A T C G A T C G A C G T A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CCCAAGACTGGTG-
-----AACAGGTGT
 A G T C A G T C A T G C C G T A C T G A A C T G C G T A A G T C A G C T A T C G A T C G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCCAAGACTGGTG
AGCCTCAGGCA----
 A C G T A C G T A G T C A G T C A T G C C G T A C T G A A C T G C G T A A G T C A G C T A T C G A T C G A C G T A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CCCAAGACTGGTG--
-----NNCAGGTGNN
 A G T C A G T C A T G C C G T A C T G A A C T G C G T A A G T C A G C T A T C G A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCCAAGACTGGTG---
NNTNNTGTCTGGNNTNG
 A C G T A G T C A G T C A T G C C G T A C T G A A C T G C G T A A G T C A G C T A T C G A T C G A C G T A C T G A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCCAAGACTGGTG
---CTGTCTGG--
 A G T C A G T C A T G C C G T A C T G A A C T G C G T A A G T C A G C T A T C G A T C G A C G T A C T G
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCCAAGACTGGTG--
---AAAACCGGTTTT
 A G T C A G T C A T G C C G T A C T G A A C T G C G T A A G T C A G C T A T C G A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCCAAGACTGGTG
CGCCTCAGGCA----
 A C G T A C G T A G T C A G T C A T G C C G T A C T G A A C T G C G T A A G T C A G C T A T C G A T C G A C G T A C T G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T