Information for 1-CTCCCGGACTGGGAGC (Motif 1)

G T A C A C G T A G T C A T G C A G T C C A T G A C T G C G T A G T A C A C G T C T A G A C T G A T C G G T C A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A T G C T G A C A G T C C G T A A C T G G C A T A G T C G A T C C T A G A T C G A C T G G T C A A C T G
p-value:1e-13
log p-value:-3.057e+01
Information Content per bp:1.798
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.7 +/- 27.7bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCCCGGACTGGGAGC
-TCCCAGMCRAGCCCC
 G T A C A C G T A G T C A T G C A G T C C A T G A C T G C G T A G T A C A C G T C T A G A C T G A T C G G T C A A C T G A G T C
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:CTCCCGGACTGGGAGC
----------CGGAGC
 G T A C A C G T A G T C A T G C A G T C C A T G A C T G C G T A G T A C A C G T C T A G A C T G A T C G G T C A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTCCCGGACTGGGAGC
ACCACTCTCGGTCAC-----
 A C G T A C G T A C G T A C G T G T A C A C G T A G T C A T G C A G T C C A T G A C T G C G T A G T A C A C G T C T A G A C T G A T C G G T C A A C T G A G T C
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CTCCCGGACTGGGAGC
----CTGTCTGG----
 G T A C A C G T A G T C A T G C A G T C C A T G A C T G C G T A G T A C A C G T C T A G A C T G A T C G G T C A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CTCCCGGACTGGGAGC
----BTGABTGACAGS
 G T A C A C G T A G T C A T G C A G T C C A T G A C T G C G T A G T A C A C G T C T A G A C T G A T C G G T C A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CTCCCGGACTGGGAGC
----NTGATTGACAGN
 G T A C A C G T A G T C A T G C A G T C C A T G A C T G C G T A G T A C A C G T C T A G A C T G A T C G G T C A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.48
Offset:12
Orientation:forward strand
Alignment:CTCCCGGACTGGGAGC-
------------CAGCC
 G T A C A C G T A G T C A T G C A G T C C A T G A C T G C G T A G T A C A C G T C T A G A C T G A T C G G T C A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:CTCCCGGACTGGGAGC-
-----TGAGTGACAGSC
 G T A C A C G T A G T C A T G C A G T C C A T G A C T G C G T A G T A C A C G T C T A G A C T G A T C G G T C A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CTCCCGGACTGGGAGC-
----CTGTCTGTCACCT
 G T A C A C G T A G T C A T G C A G T C C A T G A C T G C G T A G T A C A C G T C T A G A C T G A T C G G T C A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.47
Offset:5
Orientation:forward strand
Alignment:CTCCCGGACTGGGAGC
-----TGCGTGGGYG-
 G T A C A C G T A G T C A T G C A G T C C A T G A C T G C G T A G T A C A C G T C T A G A C T G A T C G G T C A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T