Information for 11-TGTCCGGCTGGGG (Motif 12)

A C G T C T A G A C G T A G T C A T G C A C T G A C T G A G T C A C G T A C T G A T C G T C A G A C T G
Reverse Opposite:
A G T C A G T C A T G C A G T C C G T A A C T G A G T C A G T C A T C G A C T G C G T A A G T C G T C A
p-value:1e-7
log p-value:-1.757e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.2 +/- 16.1bp
Average Position of motif in Background48.5 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTCCGGCTGGGG--
TCNCCTGCTGNGNNN
 A C G T C T A G A C G T A G T C A T G C A C T G A C T G A G T C A C G T A C T G A T C G T C A G A C T G A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTCCGGCTGGGG--
TNTCCTGCTGTGNNG
 A C G T C T A G A C G T A G T C A T G C A C T G A C T G A G T C A C G T A C T G A T C G T C A G A C T G A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTCCGGCTGGGG--
NNTCCTGCTGTGNNN
 A C G T C T A G A C G T A G T C A T G C A C T G A C T G A G T C A C G T A C T G A T C G T C A G A C T G A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTCCGGCTGGGG
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T C T A G A C G T A G T C A T G C A C T G A C T G A G T C A C G T A C T G A T C G T C A G A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTCCGGCTGGGG
CCCCCTGCTGTG-
 A C G T C T A G A C G T A G T C A T G C A C T G A C T G A G T C A C G T A C T G A T C G T C A G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGTCCGGCTGGGG
-----GGGGGGGG
 A C G T C T A G A C G T A G T C A T G C A C T G A C T G A G T C A C G T A C T G A T C G T C A G A C T G
A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCCGGCTGGGG
NNTNNTGTCTGGNNTNG-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A G T C A T G C A C T G A C T G A G T C A C G T A C T G A T C G T C A G A C T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGTCCGGCTGGGG
---CCTGCTGAGH
 A C G T C T A G A C G T A G T C A T G C A C T G A C T G A G T C A C G T A C T G A T C G T C A G A C T G
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGTCCGGCTGGGG
---CTGTCTGG--
 A C G T C T A G A C G T A G T C A T G C A C T G A C T G A G T C A C G T A C T G A T C G T C A G A C T G
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGTCCGGCTGGGG--
GGNGCGNCTGTTNNN
 A C G T C T A G A C G T A G T C A T G C A C T G A C T G A G T C A C G T A C T G A T C G T C A G A C T G A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T