Information for 5-CATTCTGTTATGA (Motif 3)

T G A C G C T A C G A T A C G T A T G C C G A T A T C G C A G T C G A T T G C A A C G T T C A G T C G A
Reverse Opposite:
A G C T A G T C T C G A A C G T G C T A G T C A A T G C G C T A T A C G T G C A G C T A C G A T A C T G
p-value:1e-13
log p-value:-3.080e+01
Information Content per bp:1.648
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif119.0
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets53.0 +/- 21.8bp
Average Position of motif in Background50.3 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CATTCTGTTATGA---
-GTNTTGTTGTGANNT
 T G A C G C T A C G A T A C G T A T G C C G A T A T C G C A G T C G A T T G C A A C G T T C A G T C G A A C G T A C G T A C G T
A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CATTCTGTTATGA
ACTTCCTGTT----
 A C G T T G A C G C T A C G A T A C G T A T G C C G A T A T C G C A G T C G A T T G C A A C G T T C A G T C G A
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CATTCTGTTATGA
NNNCCATTGTGTNAN--
 A C G T A C G T A C G T A C G T T G A C G C T A C G A T A C G T A T G C C G A T A T C G C A G T C G A T T G C A A C G T T C A G T C G A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATTCTGTTATGA---
NNTTTTGTTTTGATNT
 T G A C G C T A C G A T A C G T A T G C C G A T A T C G C A G T C G A T T G C A A C G T T C A G T C G A A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CATTCTGTTATGA
GAACADWATGTTCTT-
 A C G T A C G T A C G T T G A C G C T A C G A T A C G T A T G C C G A T A T C G C A G T C G A T T G C A A C G T T C A G T C G A
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CATTCTGTTATGA
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T T G A C G C T A C G A T A C G T A T G C C G A T A T C G C A G T C G A T T G C A A C G T T C A G T C G A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CATTCTGTTATGA
RCCATMTGTT----
 A C G T T G A C G C T A C G A T A C G T A T G C C G A T A T C G C A G T C G A T T G C A A C G T T C A G T C G A
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATTCTGTTATGA----
NNCTTTGTTTTGNTNNN
 T G A C G C T A C G A T A C G T A T G C C G A T A T C G C A G T C G A T T G C A A C G T T C A G T C G A A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATTCTGTTATGA
ACCATCTGTT----
 A C G T T G A C G C T A C G A T A C G T A T G C C G A T A T C G C A G T C G A T T G C A A C G T T C A G T C G A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CATTCTGTTATGA
GVACAGNMTGTYCTB-
 A C G T A C G T A C G T T G A C G C T A C G A T A C G T A T G C C G A T A T C G C A G T C G A T T G C A A C G T T C A G T C G A
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T