Information for 2-AATGCTGCCATCT (Motif 2)

C G T A T G C A G C A T C T A G A T G C A G C T C T A G G A T C G A T C G T C A A G C T A G T C C G A T
Reverse Opposite:
C G T A A C T G T C G A A C G T C T A G C A T G A G T C C T G A T A C G G A T C C G T A A C G T G C A T
p-value:1e-34
log p-value:-7.883e+01
Information Content per bp:1.650
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif5.92%
Number of Background Sequences with motif291.7
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets59.2 +/- 25.5bp
Average Position of motif in Background52.6 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AATGCTGCCATCT--
---GCCGCCATCTTG
 C G T A T G C A G C A T C T A G A T G C A G C T C T A G G A T C G A T C G T C A A G C T A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AATGCTGCCATCT--
---GCNGCCATCTTG
 C G T A T G C A G C A T C T A G A T G C A G C T C T A G G A T C G A T C G T C A A G C T A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AATGCTGCCATCT--------
-ANAGTGCCACCTGGTGGCCA
 C G T A T G C A G C A T C T A G A T G C A G C T C T A G G A T C G A T C G T C A A G C T A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATGCTGCCATCT-
AGATGCTRCTRCCHT
 A C G T C G T A T G C A G C A T C T A G A T G C A G C T C T A G G A T C G A T C G T C A A G C T A G T C C G A T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.60
Offset:6
Orientation:forward strand
Alignment:AATGCTGCCATCT---
------GCCATCTGTT
 C G T A T G C A G C A T C T A G A T G C A G C T C T A G G A T C G A T C G T C A A G C T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AATGCTGCCATCT
----ATGCCAACC
 C G T A T G C A G C A T C T A G A T G C A G C T C T A G G A T C G A T C G T C A A G C T A G T C C G A T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AATGCTGCCATCT--------
--TAGCGCCCCCTGGTGGCCA
 C G T A T G C A G C A T C T A G A T G C A G C T C T A G G A T C G A T C G T C A A G C T A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AATGCTGCCATCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T C G T A T G C A G C A T C T A G A T G C A G C T C T A G G A T C G A T C G T C A A G C T A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AATGCTGCCATCT
AAAATGCTGACT---
 A C G T A C G T C G T A T G C A G C A T C T A G A T G C A G C T C T A G G A T C G A T C G T C A A G C T A G T C C G A T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AATGCTGCCATCT
----CTGCCCGCA
 C G T A T G C A G C A T C T A G A T G C A G C T C T A G G A T C G A T C G T C A A G C T A G T C C G A T
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A