Information for 9-AGCCTGGGTA (Motif 13)

C T G A C T A G A G T C G A T C C G A T A C T G A C T G A T C G G C A T C G T A
Reverse Opposite:
C G A T C G T A A T G C A G T C A G T C C G T A C A T G A C T G G A T C A G C T
p-value:1e-8
log p-value:-1.876e+01
Information Content per bp:1.840
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif129.1
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets38.8 +/- 21.7bp
Average Position of motif in Background50.6 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGCCTGGGTA
WDNCTGGGCA
 C T G A C T A G A G T C G A T C C G A T A C T G A C T G A T C G G C A T C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGCCTGGGTA--
--CSTGGGAAAD
 C T G A C T A G A G T C G A T C C G A T A C T G A C T G A T C G G C A T C G T A A C G T A C G T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCCTGGGTA----
TACCCTAGTTACCGA
 A C G T C T G A C T A G A G T C G A T C C G A T A C T G A C T G A T C G G C A T C G T A A C G T A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGCCTGGGTA--
RGSMTBCTGGGAAAT
 A C G T A C G T A C G T C T G A C T A G A G T C G A T C C G A T A C T G A C T G A T C G G C A T C G T A A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTGGGTA-----
NNNNTTGGGCACNNCN
 A C G T C T G A C T A G A G T C G A T C C G A T A C T G A C T G A T C G G C A T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0158.1_Rfx3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGCCTGGGTA--------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G A G T C G A T C C G A T A C T G A C T G A T C G G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGCCTGGGTA-
--NGTGGGCAT
 C T G A C T A G A G T C G A T C C G A T A C T G A C T G A T C G G C A T C G T A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGCCTGGGTA
----TGGGGA
 C T G A C T A G A G T C G A T C C G A T A C T G A C T G A T C G G C A T C G T A
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGCCTGGGTA-
ACATGCCCGGGCAT
 A C G T A C G T A C G T C T G A C T A G A G T C G A T C C G A T A C T G A C T G A T C G G C A T C G T A A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

ZNF143/MA0088.2/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AGCCTGGGTA
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A G T C G A T C C G A T A C T G A C T G A T C G G C A T C G T A
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A