Information for 5-GCAGAGGGCGCWC (Motif 8)

T A C G A G T C C G T A A C T G C G T A A C T G A T C G A C T G G A T C A C T G A G T C G C A T A T G C
Reverse Opposite:
T A C G C G T A A C T G A G T C C T A G T G A C A T G C G T A C G C A T A G T C C G A T A C T G A G T C
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.791
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif56.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets52.7 +/- 17.5bp
Average Position of motif in Background44.8 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCAGAGGGCGCWC---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T T A C G A G T C C G T A A C T G C G T A A C T G A T C G A C T G G A T C A C T G A G T C G C A T A T G C A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAGGGCGCWC
AACAGATGGC----
 A C G T T A C G A G T C C G T A A C T G C G T A A C T G A T C G A C T G G A T C A C T G A G T C G C A T A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAGGGCGCWC
AACAGATGGT----
 A C G T T A C G A G T C C G T A A C T G C G T A A C T G A T C G A C T G G A T C A C T G A G T C G C A T A T G C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCAGAGGGCGCWC----
-TTGGGGGCGCCCCTAG
 T A C G A G T C C G T A A C T G C G T A A C T G A T C G A C T G G A T C A C T G A G T C G C A T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GCAGAGGGCGCWC
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C C G T A A C T G C G T A A C T G A T C G A C T G G A T C A C T G A G T C G C A T A T G C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCAGAGGGCGCWC---
-ATAAGGGCGCGCGAT
 T A C G A G T C C G T A A C T G C G T A A C T G A T C G A C T G G A T C A C T G A G T C G C A T A T G C A C G T A C G T A C G T
A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCAGAGGGCGCWC
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T T A C G A G T C C G T A A C T G C G T A A C T G A T C G A C T G G A T C A C T G A G T C G C A T A T G C
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

ZBTB7A/MA0750.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCAGAGGGCGCWC
TCGGTGGTCGCN-
 T A C G A G T C C G T A A C T G C G T A A C T G A T C G A C T G G A T C A C T G A G T C G C A T A T G C
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GCAGAGGGCGCWC-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C C G T A A C T G C G T A A C T G A T C G A C T G G A T C A C T G A G T C G C A T A T G C A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAGGGCGCWC
AACAKATGGY----
 A C G T T A C G A G T C C G T A A C T G C G T A A C T G A T C G A C T G G A T C A C T G A G T C G C A T A T G C
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T