Information for 9-CCGCGCGGAG (Motif 22)

A T G C A T G C T C A G A G T C A T C G A G T C C A T G A C T G C T G A C T A G
Reverse Opposite:
A G T C G A C T G T A C G A T C T C A G A T G C A C T G A G T C A T C G A T C G
p-value:1e-7
log p-value:-1.701e+01
Information Content per bp:1.830
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif4.24%
Number of Background Sequences with motif524.5
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets49.2 +/- 28.6bp
Average Position of motif in Background53.0 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CCGCGCGGAG---
GCCGCGCAGTGCGT
 A C G T A T G C A T G C T C A G A G T C A T C G A G T C C A T G A C T G C T G A C T A G A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Tcfl5/MA0632.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCGCGCGGAG
GGCACGTGCC-
 A C G T A T G C A T G C T C A G A G T C A T C G A G T C C A T G A C T G C T G A C T A G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCGCGCGGAG
GACCCCCCGCGAAG
 A C G T A C G T A C G T A C G T A T G C A T G C T C A G A G T C A T C G A G T C C A T G A C T G C T G A C T A G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCGCGCGGAG-
GACCCCCCGCTGCGC
 A C G T A C G T A C G T A C G T A T G C A T G C T C A G A G T C A T C G A G T C C A T G A C T G C T G A C T A G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGCGCGGAG-
-CCTGCTGAGH
 A T G C A T G C T C A G A G T C A T C G A G T C C A T G A C T G C T G A C T A G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCGCGCGGAG-
GACCCCCCGCTGTGC
 A C G T A C G T A C G T A C G T A T G C A T G C T C A G A G T C A T C G A G T C C A T G A C T G C T G A C T A G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGCGCGGAG
GGCACGCGTC-
 A C G T A T G C A T G C T C A G A G T C A T C G A G T C C A T G A C T G C T G A C T A G
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CCGCGCGGAG-
-----CGGAGC
 A T G C A T G C T C A G A G T C A T C G A G T C C A T G A C T G C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCGCGCGGAG
GGTCCCGCCC----
 A C G T A C G T A C G T A C G T A T G C A T G C T C A G A G T C A T C G A G T C C A T G A C T G C T G A C T A G
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCGCGCGGAG
GACCCCCCGCTGTG
 A C G T A C G T A C G T A C G T A T G C A T G C T C A G A G T C A T C G A G T C C A T G A C T G C T G A C T A G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G