Information for 7-TGCGGTCACTCGC (Motif 15)

A C G T A C T G A G T C A C T G A C T G A C G T A G T C C T G A A T G C A C G T A G T C A T C G A G T C
Reverse Opposite:
A C T G A T G C A C T G C G T A A T C G A G C T A C T G C G T A A G T C A G T C A C T G A G T C C G T A
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.941
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.2 +/- 12.0bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGTCACTCGC
TTGCGGTTT-----
 A C G T A C G T A C T G A G T C A C T G A C T G A C G T A G T C C T G A A T G C A C G T A G T C A T C G A G T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGTCACTCGC
TTTGCGGTTT-----
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A G T C C T G A A T G C A C G T A G T C A T C G A G T C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCGGTCACTCGC
-NCTGTCAATCAN
 A C G T A C T G A G T C A C T G A C T G A C G T A G T C C T G A A T G C A C G T A G T C A T C G A G T C
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGCGGTCACTCGC
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A G T C C T G A A T G C A C G T A G T C A T C G A G T C
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCGGTCACTCGC
GSCTGTCACTCA-
 A C G T A C T G A G T C A C T G A C T G A C G T A G T C C T G A A T G C A C G T A G T C A T C G A G T C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGCGGTCACTCGC
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A G T C C T G A A T G C A C G T A G T C A T C G A G T C
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCGGTCACTCGC
-SCTGTCAVTCAV
 A C G T A C T G A G T C A C T G A C T G A C G T A G T C C T G A A T G C A C G T A G T C A T C G A G T C
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCGGTCACTCGC
AGRGGTCA-----
 A C G T A C T G A G T C A C T G A C T G A C G T A G T C C T G A A T G C A C G T A G T C A T C G A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCGGTCACTCGC
TRAGGTCA-----
 A C G T A C T G A G T C A C T G A C T G A C G T A G T C C T G A A T G C A C G T A G T C A T C G A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCGGTCACTCGC
---GGTCCCGCCC
 A C G T A C T G A G T C A C T G A C T G A C G T A G T C C T G A A T G C A C G T A G T C A T C G A G T C
A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C