Information for 3-TAAAGTCATTATC (Motif 6)

A C G T T G C A C G T A C G T A A C T G A C G T A T G C C G T A A C G T C G A T C G T A A C G T A G T C
Reverse Opposite:
C T A G C G T A A C G T C G T A C G T A A C G T A T C G C G T A A G T C A C G T A C G T A C G T C G T A
p-value:1e-13
log p-value:-3.158e+01
Information Content per bp:1.926
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 23.9bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TAAAGTCATTATC
AAAAGTCAA----
 A C G T T G C A C G T A C G T A A C T G A C G T A T G C C G T A A C G T C G A T C G T A A C G T A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAAAGTCATTATC---
NNNACCTCATTATCNTN
 A C G T A C G T T G C A C G T A C G T A A C T G A C G T A T G C C G T A A C G T C G A T C G T A A C G T A G T C A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAAAGTCATTATC---
GCAACCTCATTATNNNN
 A C G T A C G T T G C A C G T A C G T A A C T G A C G T A T G C C G T A A C G T C G A T C G T A A C G T A G T C A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

MEOX2/MA0706.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TAAAGTCATTATC
---AGTAATTAAC
 A C G T T G C A C G T A C G T A A C T G A C G T A T G C C G T A A C G T C G A T C G T A A C G T A G T C
A C G T A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

PH0017.1_Cux1_2/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TAAAGTCATTATC----
--TAGTGATCATCATTA
 A C G T T G C A C G T A C G T A A C T G A C G T A T G C C G T A A C G T C G A T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAAAGTCATTATC
NTAATBNAATTA--
 A C G T A C G T T G C A C G T A C G T A A C T G A C G T A T G C C G T A A C G T C G A T C G T A A C G T A G T C
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAAAGTCATTATC--
NTNAGGTAATTACCTT
 A C G T A C G T T G C A C G T A C G T A A C T G A C G T A T G C C G T A A C G T C G A T C G T A A C G T A G T C A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TAAAGTCATTATC
--AGCTCATTAT-
 A C G T T G C A C G T A C G T A A C T G A C G T A T G C C G T A A C G T C G A T C G T A A C G T A G T C
A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TAAAGTCATTATC
----GTCATN---
 A C G T T G C A C G T A C G T A A C T G A C G T A T G C C G T A A C G T C G A T C G T A A C G T A G T C
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TAAAGTCATTATC
---GGTAATTAGC
 A C G T T G C A C G T A C G T A A C T G A C G T A T G C C G T A A C G T C G A T C G T A A C G T A G T C
A C G T A C G T A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C