Information for 14-GAAGGCACACAGT (Motif 30)

A C T G T C G A C T G A A C T G A C T G A T G C C G T A A G T C C G T A G T A C C T G A A C T G A C G T
Reverse Opposite:
C G T A A G T C G A C T A C T G G A C T A C T G A C G T A T C G A G T C A G T C A G C T A C G T A G T C
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.3 +/- 25.8bp
Average Position of motif in Background53.0 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAAGGCACACAGT---
AGCGGCACACACGCAA
 A C T G T C G A C T G A A C T G A C T G A T G C C G T A A G T C C G T A G T A C C T G A A C T G A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAGGCACACAGT
CCAGGAACAG---
 A C T G T C G A C T G A A C T G A C T G A T G C C G T A A G T C C G T A G T A C C T G A A C T G A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAAGGCACACAGT------
--GGGAACACGGTGTACCC
 A C T G T C G A C T G A A C T G A C T G A T G C C G T A A G T C C G T A G T A C C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAGGCACACAGT---
CGAAGCACACAAAATA
 A C T G T C G A C T G A A C T G A C T G A T G C C G T A A G T C C G T A G T A C C T G A A C T G A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGCACACAGT
GGTTGGCAT-----
 A C G T A C T G T C G A C T G A A C T G A C T G A T G C C G T A A G T C C G T A G T A C C T G A A C T G A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GAAGGCACACAGT
-----CACGCA--
 A C T G T C G A C T G A A C T G A C T G A T G C C G T A A G T C C G T A G T A C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAAGGCACACAGT---
-YDGHTACAWTGTADC
 A C T G T C G A C T G A A C T G A C T G A T G C C G T A A G T C C G T A G T A C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGCACACAGT
NGTGGGCAT-----
 A C G T A C T G T C G A C T G A A C T G A C T G A T G C C G T A A G T C C G T A G T A C C T G A A C T G A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGCACACAGT
NGAAGC--------
 A C G T A C T G T C G A C T G A A C T G A C T G A T G C C G T A A G T C C G T A G T A C C T G A A C T G A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GAAGGCACACAGT
--TBGCACGCAA-
 A C T G T C G A C T G A A C T G A C T G A T G C C G T A A G T C C G T A G T A C C T G A A C T G A C G T
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T