Information for 13-WWGTKGGCYTTGGAGA (Motif 21)

G C T A G C A T A T C G C A G T A C G T A C T G A C T G A T G C G A C T A G C T C G A T A C T G T C A G C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C G C A T A G T C G T A C C G T A C T G A C T G A A T C G A G T C A G T C T G C A G T C A A T G C C G T A C G A T
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.669
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 21.5bp
Average Position of motif in Background59.7 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:WWGTKGGCYTTGGAGA
-GGTTGGCAT------
 G C T A G C A T A T C G C A G T A C G T A C T G A C T G A T G C G A C T A G C T C G A T A C T G T C A G C G T A A C T G C T G A
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:WWGTKGGCYTTGGAGA
--NTTGGCANN-----
 G C T A G C A T A T C G C A G T A C G T A C T G A C T G A T G C G A C T A G C T C G A T A C T G T C A G C G T A A C T G C T G A
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:WWGTKGGCYTTGGAGA
---TTGGCA-------
 G C T A G C A T A T C G C A G T A C G T A C T G A C T G A T G C G A C T A G C T C G A T A C T G T C A G C G T A A C T G C T G A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:WWGTKGGCYTTGGAGA
-NGTGGGCAT------
 G C T A G C A T A T C G C A G T A C G T A C T G A C T G A T G C G A C T A G C T C G A T A C T G T C A G C G T A A C T G C T G A
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:WWGTKGGCYTTGGAGA
----AGGCCTAG----
 G C T A G C A T A T C G C A G T A C G T A C T G A C T G A T G C G A C T A G C T C G A T A C T G T C A G C G T A A C T G C T G A
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:WWGTKGGCYTTGGAGA
--BNTGDCCTTG----
 G C T A G C A T A T C G C A G T A C G T A C T G A C T G A T G C G A C T A G C T C G A T A C T G T C A G C G T A A C T G C T G A
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:WWGTKGGCYTTGGAGA
-NNTTGGCANN-----
 G C T A G C A T A T C G C A G T A C G T A C T G A C T G A T G C G A C T A G C T C G A T A C T G T C A G C G T A A C T G C T G A
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:WWGTKGGCYTTGGAGA
--CNAGGCCT------
 G C T A G C A T A T C G C A G T A C G T A C T G A C T G A T G C G A C T A G C T C G A T A C T G T C A G C G T A A C T G C T G A
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---WWGTKGGCYTTGGAGA
NGTAGGTTGGCATNNN---
 A C G T A C G T A C G T G C T A G C A T A T C G C A G T A C G T A C T G A C T G A T G C G A C T A G C T C G A T A C T G T C A G C G T A A C T G C T G A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:WWGTKGGCYTTGGAGA
----TGACCTTGAN--
 G C T A G C A T A T C G C A G T A C G T A C T G A C T G A T G C G A C T A G C T C G A T A C T G T C A G C G T A A C T G C T G A
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T