Information for 2-GAGGARTCGCTGCTTC (Motif 2)

T A C G G C T A A C T G A T C G G C T A C T A G G A C T A T G C T A C G A G T C G A C T A C T G A G T C C A G T C A G T T G A C
Reverse Opposite:
A C T G G T C A G T C A T A C G A G T C C G T A C T A G A T G C A T C G C T G A A G T C C A G T A T G C A G T C C G A T A T G C
p-value:1e-16
log p-value:-3.769e+01
Information Content per bp:1.698
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.7 +/- 23.7bp
Average Position of motif in Background34.8 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAGGARTCGCTGCTTC-
--GGNGCGNCTGTTNNN
 T A C G G C T A A C T G A T C G G C T A C T A G G A C T A T G C T A C G A G T C G A C T A C T G A G T C C A G T C A G T T G A C A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GAGGARTCGCTGCTTC
NTNNNAGGAGTCTCNTN---
 A C G T A C G T A C G T A C G T T A C G G C T A A C T G A T C G G C T A C T A G G A C T A T G C T A C G A G T C G A C T A C T G A G T C C A G T C A G T T G A C
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGGARTCGCTGCTTC
GCGGAGGTGTCGCCTC---
 A C G T A C G T A C G T T A C G G C T A A C T G A T C G G C T A C T A G G A C T A T G C T A C G A G T C G A C T A C T G A G T C C A G T C A G T T G A C
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.53
Offset:11
Orientation:forward strand
Alignment:GAGGARTCGCTGCTTC-
-----------GCTTCC
 T A C G G C T A A C T G A T C G G C T A C T A G G A C T A T G C T A C G A G T C G A C T A C T G A G T C C A G T C A G T T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGGARTCGCTGCTTC
CCWGGAATGY-------
 A C G T T A C G G C T A A C T G A T C G G C T A C T A G G A C T A T G C T A C G A G T C G A C T A C T G A G T C C A G T C A G T T G A C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGGARTCGCTGCTTC
AGAGGAA----------
 A C G T T A C G G C T A A C T G A T C G G C T A C T A G G A C T A T G C T A C G A G T C G A C T A C T G A G T C C A G T C A G T T G A C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GAGGARTCGCTGCTTC
NCTGGAATGC-------
 A C G T T A C G G C T A A C T G A T C G G C T A C T A G G A C T A T G C T A C G A G T C G A C T A C T G A G T C C A G T C A G T T G A C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GAGGARTCGCTGCTTC
GTCATGCHTGRCTGS---
 A C G T A C G T T A C G G C T A A C T G A T C G G C T A C T A G G A C T A T G C T A C G A G T C G A C T A C T G A G T C C A G T C A G T T G A C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GAGGARTCGCTGCTTC
----AGCAGCTGCT--
 T A C G G C T A A C T G A T C G G C T A C T A G G A C T A T G C T A C G A G T C G A C T A C T G A G T C C A G T C A G T T G A C
A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GAGGARTCGCTGCTTC
CAAAGGCGTGGCCAG---
 A C G T A C G T T A C G G C T A A C T G A T C G G C T A C T A G G A C T A T G C T A C G A G T C G A C T A C T G A G T C C A G T C A G T T G A C
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T A C G T A C G T