Information for 9-ATCTAAATCAAGVAGT (Motif 17)

C G T A A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G T C G T C A C T G A A C T G T C G A C T G A C T A G C G A T
Reverse Opposite:
G C T A A G T C A G C T A C G T T G A C A G C T A C G T A C T G C G T A A C G T A C G T A C G T G T C A A C T G G T C A C G A T
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.772
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 23.4bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATCTAAATCAAGVAGT
---CAAATCACTG---
 C G T A A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G T C G T C A C T G A A C T G T C G A C T G A C T A G C G A T
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATCTAAATCAAGVAGT--
--GAAGATCAATCACTAA
 C G T A A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G T C G T C A C T G A A C T G T C G A C T G A C T A G C G A T A C G T A C G T
A C G T A C G T T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATCTAAATCAAGVAGT
--HNRAATCAAT----
 C G T A A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G T C G T C A C T G A A C T G T C G A C T G A C T A G C G A T
A C G T A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATCTAAATCAAGVAGT
AAGGCGAAATCATCGCA-
 A C G T A C G T C G T A A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G T C G T C A C T G A A C T G T C G A C T G A C T A G C G A T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATCTAAATCAAGVAGT--
--GAAGATCAATCACTTA
 C G T A A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G T C G T C A C T G A A C T G T C G A C T G A C T A G C G A T A C G T A C G T
A C G T A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATCTAAATCAAGVAGT
ATAAACCGAAACCAA-----
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G T C G T C A C T G A A C T G T C G A C T G A C T A G C G A T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATCTAAATCAAGVAGT
CTGATCGAAACCAAAGT--
 A C G T A C G T A C G T C G T A A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G T C G T C A C T G A A C T G T C G A C T G A C T A G C G A T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ATCTAAATCAAGVAGT
NNAGATNVNWATCTN-----
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G T C G T C A C T G A A C T G T C G A C T G A C T A G C G A T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ATCTAAATCAAGVAGT
----CCATCAATCAAA
 C G T A A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G T C G T C A C T G A A C T G T C G A C T G A C T A G C G A T
A C G T A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ATCTAAATCAAGVAGT
CGTATCGAAACCAAA----
 A C G T A C G T A C G T C G T A A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G T C G T C A C T G A A C T G T C G A C T G A C T A G C G A T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T A C G T A C G T A C G T