Information for 1-AGCTTGGAAG (Motif 11)

C G T A A T C G A T G C G C A T G A C T C A T G T A C G T G C A T C G A T A C G
Reverse Opposite:
A T G C A G C T A C G T A T G C G T A C C T G A C G T A T A C G T A G C G C A T
p-value:1e-11
log p-value:-2.751e+01
Information Content per bp:1.469
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif11.39%
Number of Background Sequences with motif2428.3
Percentage of Background Sequences with motif4.96%
Average Position of motif in Targets50.9 +/- 27.4bp
Average Position of motif in Background50.1 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:AGCTTGGAAG-
-----NGAAGC
 C G T A A T C G A T G C G C A T G A C T C A T G T A C G T G C A T C G A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGCTTGGAAG
--CTTGGCAA
 C G T A A T C G A T G C G C A T G A C T C A T G T A C G T G C A T C G A T A C G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCTTGGAAG
CTTCTGGGAAA
 A C G T C G T A A T C G A T G C G C A T G A C T C A T G T A C G T G C A T C G A T A C G
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGCTTGGAAG--
--NNTGGAAANN
 C G T A A T C G A T G C G C A T G A C T C A T G T A C G T G C A T C G A T A C G A C G T A C G T
A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCTTGGAAG-
TTCTTGGAAAN
 C G T A A T C G A T G C G C A T G A C T C A T G T A C G T G C A T C G A T A C G A C G T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGCTTGGAAG-
----TGGAAAA
 C G T A A T C G A T G C G C A T G A C T C A T G T A C G T G C A T C G A T A C G A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCTTGGAAG-
-CCTTTGATGT
 C G T A A T C G A T G C G C A T G A C T C A T G T A C G T G C A T C G A T A C G A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGCTTGGAAG
---TTGGCA-
 C G T A A T C G A T G C G C A T G A C T C A T G T A C G T G C A T C G A T A C G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCTTGGAAG-
-NNTTGGCANN
 C G T A A T C G A T G C G C A T G A C T C A T G T A C G T G C A T C G A T A C G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCTTGGAAG-
-CCTTTGAWGT
 C G T A A T C G A T G C G C A T G A C T C A T G T A C G T G C A T C G A T A C G A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T