Information for 4-CAAATTTACCCCC (Motif 6)

A G T C C G T A C G T A G T C A A C G T A C G T A G C T C G T A G T A C A G T C A G T C A G T C A T G C
Reverse Opposite:
A T C G A C T G A C T G C T A G A C T G A C G T C T G A C G T A C G T A A C G T A C G T A C G T C T A G
p-value:1e-11
log p-value:-2.675e+01
Information Content per bp:1.923
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 19.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CAAATTTACCCCC
NNNNTGAATTCANNNC-
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A G T C A A C G T A C G T A G C T C G T A G T A C A G T C A G T C A G T C A T G C
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAAATTTACCCCC----
NNNNGGTACCCCCCANN
 A G T C C G T A C G T A G T C A A C G T A C G T A G C T C G T A G T A C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAAATTTACCCCC----
NNANTTGACCCCTNNNN
 A G T C C G T A C G T A G T C A A C G T A C G T A G C T C G T A G T A C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0201.1_Zfp281_2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAAATTTACCCCC------
--AGGAGACCCCCAATTTG
 A G T C C G T A C G T A G T C A A C G T A C G T A G C T C G T A G T A C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAAATTTACCCCC------
--AAATTCCCCCCGGAAGT
 A G T C C G T A C G T A G T C A A C G T A C G T A G C T C G T A G T A C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAATTTACCCCC-----
-AAGCATACGCCCAACTT
 A G T C C G T A C G T A G T C A A C G T A C G T A G C T C G T A G T A C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAAATTTACCCCC----
NANANTTAATCCCNNNN
 A G T C C G T A C G T A G T C A A C G T A C G T A G C T C G T A G T A C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAAATTTACCCCC-----
--TATCGACCCCCCACAG
 A G T C C G T A C G T A G T C A A C G T A C G T A G C T C G T A G T A C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PH0129.1_Otx1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAAATTTACCCCC---
NNNAATTAATCCCCNCN
 A C G T A G T C C G T A C G T A G T C A A C G T A C G T A G C T C G T A G T A C A G T C A G T C A G T C A T G C A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAAATTTACCCCC----
GATAATTAATCCCTCTT
 A G T C C G T A C G T A G T C A A C G T A C G T A G C T C G T A G T A C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T