Information for 11-TGTAACACTC (Motif 26)

A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A
p-value:1e-5
log p-value:-1.290e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.3 +/- 26.7bp
Average Position of motif in Background59.2 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGTAACACTC
AATGTATCAAT-
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTAACACTC--
--MRSCACTYAA
 A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTAACACTC
--NAACAAT-
 A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTAACACTC
GCTGTTACCCT-
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTAACACTC
KTTCACACCT
 A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGTAACACTC---
---RSCACTYRAG
 A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGTAACACTC--
--AASCACTCAA
 A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTAACACTC
TTGCAACATN-
 A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTAACACTC-
TTTCACACCTN
 A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGTAACACTC
---AACAAT-
 A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T