Information for 10-CAACARTCAC (Motif 25)

A T G C G T C A G T C A T A G C G T C A C T A G C G A T A G T C T C G A T G A C
Reverse Opposite:
A C T G A G C T A C T G G C T A G A T C A C G T A T C G A C G T A C G T A T C G
p-value:1e-6
log p-value:-1.603e+01
Information Content per bp:1.750
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif128.0
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets49.4 +/- 18.1bp
Average Position of motif in Background53.4 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAACARTCAC
NAACAAT---
 A T G C G T C A G T C A T A G C G T C A C T A G C G A T A G T C T C G A T G A C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAACARTCAC
-AACAAT---
 A T G C G T C A G T C A T A G C G T C A C T A G C G A T A G T C T C G A T G A C
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAACARTCAC
CCAACTGCCA-
 A C G T A T G C G T C A G T C A T A G C G T C A C T A G C G A T A G T C T C G A T G A C
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAACARTCAC---
AGCAACAGCCGCACC
 A C G T A C G T A T G C G T C A G T C A T A G C G T C A C T A G C G A T A G T C T C G A T G A C A C G T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAACARTCAC-
CCATCAATCAAA
 A C G T A T G C G T C A G T C A T A G C G T C A C T A G C G A T A G T C T C G A T G A C A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAACARTCAC
CCAACTGCCA-
 A C G T A T G C G T C A G T C A T A G C G T C A C T A G C G A T A G T C T C G A T G A C
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAACARTCAC
TCATCAATCA-
 A C G T A T G C G T C A G T C A T A G C G T C A C T A G C G A T A G T C T C G A T G A C
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAACARTCAC---
GAAGATCAATCACTTA
 A C G T A C G T A C G T A T G C G T C A G T C A T A G C G T C A C T A G C G A T A G T C T C G A T G A C A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CAACARTCAC
NTTNAGAACAATTA-
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A G T C A T A G C G T C A C T A G C G A T A G T C T C G A T G A C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAACARTCAC---
AATGAACAATGGAATT
 A C G T A C G T A C G T A T G C G T C A G T C A T A G C G T C A C T A G C G A T A G T C T C G A T G A C A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T