Information for 11-AGGCCCTMTCTCT (Motif 23)

C G T A C A T G A C T G T A G C A G T C A G T C G A C T G T A C G A C T A G T C A G C T T A G C A C G T
Reverse Opposite:
C G T A A T C G C T G A C T A G C T G A C A T G C T G A T C A G C T A G A T C G T A G C G A T C G C A T
p-value:1e-7
log p-value:-1.684e+01
Information Content per bp:1.688
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif227.6
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets53.8 +/- 28.5bp
Average Position of motif in Background49.9 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCCTMTCTCT
NNGCACCTTTCTCC
 A C G T C G T A C A T G A C T G T A G C A G T C A G T C G A C T G T A C G A C T A G T C A G C T T A G C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGGCCCTMTCTCT---
----ACTTTCACTTTC
 C G T A C A T G A C T G T A G C A G T C A G T C G A C T G T A C G A C T A G T C A G C T T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGGCCCTMTCTCT----
--TCACTTTCACTTTCN
 C G T A C A T G A C T G T A G C A G T C A G T C G A C T G T A C G A C T A G T C A G C T T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGCCCTMTCTCT
--TTCTTATCTGT
 C G T A C A T G A C T G T A G C A G T C A G T C G A C T G T A C G A C T A G T C A G C T T A G C A C G T
A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGCCCTMTCTCT-
---TCTTATCTCCC
 C G T A C A T G A C T G T A G C A G T C A G T C G A C T G T A C G A C T A G T C A G C T T A G C A C G T A C G T
A C G T A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGCCCTMTCTCT
-KGCCCTTCCCCA
 C G T A C A T G A C T G T A G C A G T C A G T C G A C T G T A C G A C T A G T C A G C T T A G C A C G T
A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGGCCCTMTCTCT
---CACTTCCTCT
 C G T A C A T G A C T G T A G C A G T C A G T C G A C T G T A C G A C T A G T C A G C T T A G C A C G T
A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGGCCCTMTCTCT----
-ANTCCTTTGTCTNNNN
 C G T A C A T G A C T G T A G C A G T C A G T C G A C T G T A C G A C T A G T C A G C T T A G C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGGCCCTMTCTCT
--NCCTTATCTG-
 C G T A C A T G A C T G T A G C A G T C A G T C G A C T G T A C G A C T A G T C A G C T T A G C A C G T
A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AGGCCCTMTCTCT-
----CCTTTGTTTT
 C G T A C A T G A C T G T A G C A G T C A G T C G A C T G T A C G A C T A G T C A G C T T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T