Information for 5-TWTHARCTARAAATGG (Motif 13)

C G A T G C T A A C G T G T C A G C T A C T G A A G T C C G A T T C G A C T A G G T C A C T G A G T C A C G A T C T A G T C A G
Reverse Opposite:
A G T C A G T C C G T A A C G T A G C T A C G T G A T C A G C T C G T A C T A G G A C T C G A T C A G T T G C A C G A T C G T A
p-value:1e-9
log p-value:-2.128e+01
Information Content per bp:1.646
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.6 +/- 18.9bp
Average Position of motif in Background37.9 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:TWTHARCTARAAATGG-
-----GCTATAAATAGC
 C G A T G C T A A C G T G T C A G C T A C T G A A G T C C G A T T C G A C T A G G T C A C T G A G T C A C G A T C T A G T C A G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.71
Offset:5
Orientation:forward strand
Alignment:TWTHARCTARAAATGG-
-----ACTATAAATAGA
 C G A T G C T A A C G T G T C A G C T A C T G A A G T C C G A T T C G A C T A G G T C A C T G A G T C A C G A T C T A G T C A G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.68
Offset:5
Orientation:forward strand
Alignment:TWTHARCTARAAATGG-
-----TCTAAAAATAGA
 C G A T G C T A A C G T G T C A G C T A C T G A A G T C C G A T T C G A C T A G G T C A C T G A G T C A C G A T C T A G T C A G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TWTHARCTARAAATGG-
-----GCTAAAAATAGC
 C G A T G C T A A C G T G T C A G C T A C T G A A G T C C G A T T C G A C T A G G T C A C T G A G T C A C G A T C T A G T C A G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.65
Offset:6
Orientation:forward strand
Alignment:TWTHARCTARAAATGG
------CCAAAAATAG
 C G A T G C T A A C G T G T C A G C T A C T G A A G T C C G A T T C G A C T A G G T C A C T G A G T C A C G A T C T A G T C A G
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TWTHARCTARAAATGG-
-----DCYAAAAATAGM
 C G A T G C T A A C G T G T C A G C T A C T G A A G T C C G A T T C G A C T A G G T C A C T G A G T C A C G A T C T A G T C A G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TWTHARCTARAAATGG--
---ATGCTAAAAATAGAA
 C G A T G C T A A C G T G T C A G C T A C T G A A G T C C G A T T C G A C T A G G T C A C T G A G T C A C G A T C T A G T C A G A C G T A C G T
A C G T A C G T A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TWTHARCTARAAATGG-
-----KCCAAAAATAGC
 C G A T G C T A A C G T G T C A G C T A C T G A A G T C C G A T T C G A C T A G G T C A C T G A G T C A C G A T C T A G T C A G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TWTHARCTARAAATGG
------CCATATATGG
 C G A T G C T A A C G T G T C A G C T A C T G A A G T C C G A T T C G A C T A G G T C A C T G A G T C A C G A T C T A G T C A G
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TWTHARCTARAAATGG
--------RACAAWGG
 C G A T G C T A A C G T G T C A G C T A C T G A A G T C C G A T T C G A C T A G G T C A C T G A G T C A C G A T C T A G T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G