Information for 5-ACCCTGGCCSCDA (Motif 12)

C T G A A T G C T A G C G T A C A C G T A C T G A C T G A G T C G T A C T A C G A G T C C T A G G C T A
Reverse Opposite:
C G A T G A T C C T A G A T G C C A T G A C T G A G T C A G T C C G T A A C T G A T C G A T C G A G C T
p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.735
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif120.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets47.2 +/- 17.6bp
Average Position of motif in Background51.9 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACCCTGGCCSCDA
--NTTGGCANN--
 C T G A A T G C T A G C G T A C A C G T A C T G A C T G A G T C G T A C T A C G A G T C C T A G G C T A
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ACCCTGGCCSCDA
---TTGGCA----
 C T G A A T G C T A G C G T A C A C G T A C T G A C T G A G T C G T A C T A C G A G T C C T A G G C T A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACCCTGGCCSCDA
--CTTGGCAA---
 C T G A A T G C T A G C G T A C A C G T A C T G A C T G A G T C G T A C T A C G A G T C C T A G G C T A
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACCCTGGCCSCDA
CAAGATGGCGGC--
 A C G T C T G A A T G C T A G C G T A C A C G T A C T G A C T G A G T C G T A C T A C G A G T C C T A G G C T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACCCTGGCCSCDA
GTTGCCATGGCAAC--
 A C G T A C G T A C G T C T G A A T G C T A G C G T A C A C G T A C T G A C T G A G T C G T A C T A C G A G T C C T A G G C T A
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACCCTGGCCSCDA
CAATCACTGGCAGAAT
 A C G T A C G T A C G T C T G A A T G C T A G C G T A C A C G T A C T G A C T G A G T C G T A C T A C G A G T C C T A G G C T A
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACCCTGGCCSCDA---
NNNNTTGGCGCCGANNN
 A C G T C T G A A T G C T A G C G T A C A C G T A C T G A C T G A G T C G T A C T A C G A G T C C T A G G C T A A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACCCTGGCCSCDA
TTGCCATGGCAACN-
 A C G T A C G T C T G A A T G C T A G C G T A C A C G T A C T G A C T G A G T C G T A C T A C G A G T C C T A G G C T A
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACCCTGGCCSCDA
CAAGATGGCGGC--
 A C G T C T G A A T G C T A G C G T A C A C G T A C T G A C T G A G T C G T A C T A C G A G T C C T A G G C T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACCCTGGCCSCDA-
TACCATAGCAACGGT
 A C G T C T G A A T G C T A G C G T A C A C G T A C T G A C T G A G T C G T A C T A C G A G T C C T A G G C T A A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T