Information for 2-CTGTGACYCCCTG (Motif 5)

A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G C T A G T C A G T C A T G C A C G T A T C G
Reverse Opposite:
A T G C C G T A A T C G C T A G A C T G C T G A T A C G A C G T A G T C C G T A A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 19.5bp
Average Position of motif in Background69.3 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGTGACYCCCTG
GCTGTG--------
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G C T A G T C A G T C A T G C A C G T A T C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGTGACYCCCTG--
TGTCGTGACCCCTTAAT
 A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G C T A G T C A G T C A T G C A C G T A T C G A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGACYCCCTG
GCTGTTACCCT---
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G C T A G T C A G T C A T G C A C G T A T C G
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGTGACYCCCTG
GSCTGTCACTCA---
 A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G C T A G T C A G T C A T G C A C G T A T C G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGACYCCCTG--
NNNNTGACCCGGCGCG
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G C T A G T C A G T C A T G C A C G T A T C G A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGTGACYCCCTG
---TGACCYCT--
 A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G C T A G T C A G T C A T G C A C G T A T C G
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGTGACYCCCTG
NCTGTCAATCAN--
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G C T A G T C A G T C A T G C A C G T A T C G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGACYCCCTG
TGACCTTTGACCCC---
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G C T A G T C A G T C A T G C A C G T A T C G
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGACYCCCTG--
NNNNTTGACCCCTNNNN
 A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G C T A G T C A G T C A T G C A C G T A T C G A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CTGTGACYCCCTG
ATTGGACTTTGACCCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G C T A G T C A G T C A T G C A C G T A T C G
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T