Information for 11-GGGAAATCGA (Motif 47)

A C T G A C T G C T A G C G T A C G T A C G T A A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A A C G T A C G T A C G T A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.959
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 7.9bp
Average Position of motif in Background61.3 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT1/MA0679.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGAAATCGA----
AAAAAATCGATAAT
 A C T G A C T G C T A G C G T A C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

ONECUT2/MA0756.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGAAATCGA----
AAAAAATCGATAAT
 A C T G A C T G C T A G C G T A C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAATCGA
NATGGAAAAN---
 A C G T A C G T A C G T A C T G A C T G C T A G C G T A C G T A C G T A A C G T A G T C A C T G C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGGAAATCGA----
AAAAAATCAATAAT
 A C T G A C T G C T A G C G T A C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAATCGA
TGGAAAA----
 A C G T A C T G A C T G C T A G C G T A C G T A C G T A A C G T A G T C A C T G C G T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAATCGA
AATGGAAAAT---
 A C G T A C G T A C G T A C T G A C T G C T A G C G T A C G T A C G T A A C G T A G T C A C T G C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGGAAATCGA---
---TAATCGATAA
 A C T G A C T G C T A G C G T A C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

CUX1/MA0754.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGGAAATCGA---
---TAATCGATAA
 A C T G A C T G C T A G C G T A C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAATCGA
CSTGGGAAAD---
 A C G T A C G T A C G T A C T G A C T G C T A G C G T A C G T A C G T A A C G T A G T C A C T G C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGAAATCGA-
-HNRAATCAAT
 A C T G A C T G C T A G C G T A C G T A C G T A A C G T A G T C A C T G C G T A A C G T
A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T