p-value: | 1e-6 |
log p-value: | -1.426e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.40% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 53.0 +/- 28.6bp |
Average Position of motif in Background | 39.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGAACTAGGT-- --AAYTAGGTCA |
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PB0200.1_Zfp187_2/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGAACTAGGT--- NNAGGGACAAGGGCNC |
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PH0040.1_Hmbox1/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGAACTAGGT--- GANGTTAACTAGTTTNN |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGAACTAGGT--- TTGACCTANTTATN |
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HMBOX1/MA0895.1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGAACTAGGT GTTAACTAGN- |
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PH0168.1_Hnf1b/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TGAACTAGGT-- AGCTGTTAACTAGCCGT |
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RORA/MA0071.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGAACTAGGT TGACCTTGAT |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGAACTAGGT CTGACCTTTG- |
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LBX1/MA0618.1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGAACTAGGT TTAATTAG-- |
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Vdr/MA0693.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGAACTAGGT------ TGAACTCNATGAACTC |
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