Information for 22-GCTCCCTCTGCTTTSG (Motif 40)

A T C G A T G C G A C T A G T C G T A C G A T C A C G T A G T C A C G T A C T G A G T C C G A T A C G T G A C T A T G C T A C G
Reverse Opposite:
A T G C T A C G C T G A T G C A C G T A C T A G G T A C G T C A C T A G T C G A C T A G A C T G T A C G C G T A A T C G A T G C
p-value:1e-7
log p-value:-1.776e+01
Information Content per bp:1.672
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif167.9
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets44.8 +/- 25.6bp
Average Position of motif in Background53.3 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTCCCTCTGCTTTSG
--ACCATCTGTT----
 A T C G A T G C G A C T A G T C G T A C G A T C A C G T A G T C A C G T A C T G A G T C C G A T A C G T G A C T A T G C T A C G
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTCCCTCTGCTTTSG
GCTCCG----------
 A T C G A T G C G A C T A G T C G T A C G A T C A C G T A G T C A C G T A C T G A G T C C G A T A C G T G A C T A T G C T A C G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCTCCCTCTGCTTTSG
--GCCATCTGTT----
 A T C G A T G C G A C T A G T C G T A C G A T C A C G T A G T C A C G T A C T G A G T C C G A T A C G T G A C T A T G C T A C G
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCTCCCTCTGCTTTSG
---CCCCCTGCTGTG-
 A T C G A T G C G A C T A G T C G T A C G A T C A C G T A G T C A C G T A C T G A G T C C G A T A C G T G A C T A T G C T A C G
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCTCCCTCTGCTTTSG
--RCCATMTGTT----
 A T C G A T G C G A C T A G T C G T A C G A T C A C G T A G T C A C G T A C T G A G T C C G A T A C G T G A C T A T G C T A C G
A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCTCCCTCTGCTTTSG
----CCTTTGTTTT--
 A T C G A T G C G A C T A G T C G T A C G A T C A C G T A G T C A C G T A C T G A G T C C G A T A C G T G A C T A T G C T A C G
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCCTCTGCTTTSG
TACTTCCGCTTTTT---
 A C G T A T C G A T G C G A C T A G T C G T A C G A T C A C G T A G T C A C G T A C T G A G T C C G A T A C G T G A C T A T G C T A C G
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCTCCCTCTGCTTTSG
--TNCCTTTGATGT--
 A T C G A T G C G A C T A G T C G T A C G A T C A C G T A G T C A C G T A C T G A G T C C G A T A C G T G A C T A T G C T A C G
A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCTCCCTCTGCTTTSG
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C G A C T A G T C G T A C G A T C A C G T A G T C A C G T A C T G A G T C C G A T A C G T G A C T A T G C T A C G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCCTCTGCTTTSG-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A T C G A T G C G A C T A G T C G T A C G A T C A C G T A G T C A C G T A C T G A G T C C G A T A C G T G A C T A T G C T A C G A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A