Information for 14-AATTAATCGTGGA (Motif 35)

C G T A C G T A A C G T A G C T C G T A G T C A A C G T A T G C A C T G A C G T A C T G A C T G C G T A
Reverse Opposite:
C G A T A G T C A G T C C G T A A G T C A T C G C G T A A C G T A C G T C T G A C G T A A C G T A C G T
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.8 +/- 11.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATTAATCGTGGA
AATTATT------
 C G T A C G T A A C G T A G C T C G T A G T C A A C G T A T G C A C T G A C G T A C T G A C T G C G T A
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0008.1_Barx2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AATTAATCGTGGA
TAAGTAATTAGTTATA--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A A C G T A T G C A C T G A C G T A C T G A C T G C G T A
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A A C G T A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATTAATCGTGGA
CTAATTAA-------
 A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A A C G T A T G C A C T G A C G T A C T G A C T G C G T A
A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LMX1B/MA0703.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATTAATCGTGGA
TTAATTAA-------
 A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A A C G T A T G C A C T G A C G T A C T G A C T G C G T A
A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0160.1_Shox2/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AATTAATCGTGGA
CGCGTTAATTAATTGTG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A A C G T A T G C A C T G A C G T A C T G A C T G C G T A
T A G C C A T G G T A C T A C G A G C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A C A G T A G C T T C A G C A G T A T C G A C G T A C G T

PH0135.1_Phox2a/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AATTAATCGTGGA
NNACTAATTAATNNNN--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A A C G T A T G C A C T G A C G T A C T G A C T G C G T A
A T G C A G C T T C G A G A T C A G C T G T C A C G T A A G C T A C G T C T G A C T G A A G C T C A T G T G A C A G C T T C A G A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AATTAATCGTGGA
GCCAATTAAC------
 A C G T A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A A C G T A T G C A C T G A C G T A C T G A C T G C G T A
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0030.1_Esx1/Jaspar

Match Rank:8
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------AATTAATCGTGGA
ATCCATTAATTAATTGA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A A C G T A T G C A C T G A C G T A C T G A C T G C G T A
G C T A G C A T A G T C A T G C C T G A G A C T G A C T C G T A C T G A A G C T G A C T C T G A C T G A A G C T C A G T A T C G G C T A A C G T A C G T A C G T

PH0055.1_Hoxa7_2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AATTAATCGTGGA
GTAGTAATTAATGGAA--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A A C G T A T G C A C T G A C G T A C T G A C T G C G T A
A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A A C G T A C G T

UNCX/MA0721.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATTAATCGTGGA
CTAATTAA-------
 A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A A C G T A T G C A C T G A C G T A C T G A C T G C G T A
A G T C G A C T C T G A G T C A G A C T G A C T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T