Information for 5-CCCTCTGAGG (Motif 28)

T A G C G A T C G A T C A C G T A T G C G C A T C T A G C T G A C T A G T A C G
Reverse Opposite:
A G T C G A T C G A C T G A T C C G T A T A C G T G C A C T A G C T A G A T C G
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.652
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif9.42%
Number of Background Sequences with motif2045.4
Percentage of Background Sequences with motif4.28%
Average Position of motif in Targets58.7 +/- 27.7bp
Average Position of motif in Background50.1 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCCTCTGAGG--
TCCCCTGGGGAC
 T A G C G A T C G A T C A C G T A T G C G C A T C T A G C T G A C T A G T A C G A C G T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCTCTGAGG
CCTGCTGAGH
 T A G C G A T C G A T C A C G T A T G C G C A T C T A G C T G A C T A G T A C G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCCTCTGAGG-
-CCTTTGAWGT
 T A G C G A T C G A T C A C G T A T G C G C A T C T A G C T G A C T A G T A C G A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTGAGG---
CCCCCCCGGGGGGGT
 A C G T A C G T T A G C G A T C G A T C A C G T A T G C G C A T C T A G C T G A C T A G T A C G A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTGAGG---
CCCCCCCGGGGGGGT
 A C G T A C G T T A G C G A T C G A T C A C G T A T G C G C A T C T A G C T G A C T A G T A C G A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTGAGG--
CACCCCCGGGGGGG
 A C G T A C G T T A G C G A T C G A T C A C G T A T G C G C A T C T A G C T G A C T A G T A C G A C G T A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------CCCTCTGAGG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G A T C A C G T A T G C G C A T C T A G C T G A C T A G T A C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCCTCTGAGG
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T T A G C G A T C G A T C A C G T A T G C G C A T C T A G C T G A C T A G T A C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCTCTGAGG-
TNCCTTTGATGT
 A C G T T A G C G A T C G A T C A C G T A T G C G C A T C T A G C T G A C T A G T A C G A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCTGAGG
CCCCCTGCTGTG-
 A C G T A C G T A C G T T A G C G A T C G A T C A C G T A T G C G C A T C T A G C T G A C T A G T A C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T