Information for 3-TGTTGCCTTT (Motif 20)

G C A T A T C G G A C T G C A T T A C G A G T C G T A C G A C T G A C T G C A T
Reverse Opposite:
C G T A C T G A C T G A C A T G T C A G A T G C C G T A C T G A T A G C C G T A
p-value:1e-10
log p-value:-2.317e+01
Information Content per bp:1.650
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif13.26%
Number of Background Sequences with motif3200.6
Percentage of Background Sequences with motif6.70%
Average Position of motif in Targets44.6 +/- 24.7bp
Average Position of motif in Background50.1 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGTTGCCTTT-
--TTGACTTTT
 G C A T A T C G G A C T G C A T T A C G A G T C G T A C G A C T G A C T G C A T A C G T
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTTGCCTTT
TGTTTACTTT
 G C A T A T C G G A C T G C A T T A C G A G T C G T A C G A C T G A C T G C A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTTGCCTTT
TGTTTACTTT
 G C A T A T C G G A C T G C A T T A C G A G T C G T A C G A C T G A C T G C A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTTGCCTTT
TRTTTACTTW
 G C A T A T C G G A C T G C A T T A C G A G T C G T A C G A C T G A C T G C A T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGCCTTT---
CAGTTTCGNTTCTN
 A C G T G C A T A T C G G A C T G C A T T A C G A G T C G T A C G A C T G A C T G C A T A C G T A C G T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGCCTTT
TTTGTTTACTTA
 A C G T A C G T G C A T A T C G G A C T G C A T T A C G A G T C G T A C G A C T G A C T G C A T
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGCCTTT
NNACTTGCCTT-
 A C G T A C G T G C A T A T C G G A C T G C A T T A C G A G T C G T A C G A C T G A C T G C A T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTTGCCTTT--
TGTTTACTTAGG
 G C A T A T C G G A C T G C A T T A C G A G T C G T A C G A C T G A C T G C A T A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGTTGCCTTT-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T G C A T A T C G G A C T G C A T T A C G A G T C G T A C G A C T G A C T G C A T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGTTGCCTTT
CNTGTTTACATA
 A C G T A C G T G C A T A T C G G A C T G C A T T A C G A G T C G T A C G A C T G A C T G C A T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A